Gene : KT2 A. thaliana TAIR10
Primary Identifier:  ? AT2G40540 Defline:  (1 of 1) PTHR30540//PTHR30540:SF6 - OSMOTIC STRESS POTASSIUM TRANSPORTER // POTASSIUM TRANSPORTER 2
Genomic Order:  3438 Name:  ? AT2G40540
Secondary Identifier:  ? PAC:19642963
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Genomics

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Expression

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40540 0.5kb upstream 0.5kb upstream 4225 true Chr2: 16930364-16934588 Arabidopsis thaliana
AT2G40540 0.5kb upstream 0.5kb upstream 500 false Chr2: 16930364-16930863 Arabidopsis thaliana
AT2G40540 0.5kb downstream 0.5kb downstream 4225 true Chr2: 16930864-16935088 Arabidopsis thaliana
AT2G40540 0.5kb downstream 0.5kb downstream 500 false Chr2: 16934589-16935088 Arabidopsis thaliana
AT2G40540 1.0kb upstream 1.0kb upstream 4725 true Chr2: 16929864-16934588 Arabidopsis thaliana
AT2G40540 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16929864-16930863 Arabidopsis thaliana
AT2G40540 1.0kb downstream 1.0kb downstream 4725 true Chr2: 16930864-16935588 Arabidopsis thaliana
AT2G40540 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16934589-16935588 Arabidopsis thaliana
AT2G40540 2.0kb upstream 2.0kb upstream 5725 true Chr2: 16928864-16934588 Arabidopsis thaliana
AT2G40540 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16928864-16930863 Arabidopsis thaliana
AT2G40540 2.0kb downstream 2.0kb downstream 5725 true Chr2: 16930864-16936588 Arabidopsis thaliana
AT2G40540 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16934589-16936588 Arabidopsis thaliana
AT2G40540 5.0kb upstream 5.0kb upstream 8725 true Chr2: 16925864-16934588 Arabidopsis thaliana
AT2G40540 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16925864-16930863 Arabidopsis thaliana
AT2G40540 5.0kb downstream 5.0kb downstream 8725 true Chr2: 16930864-16939588 Arabidopsis thaliana
AT2G40540 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16934589-16939588 Arabidopsis thaliana
AT2G40540 10.0kb upstream 10.0kb upstream 13725 true Chr2: 16920864-16934588 Arabidopsis thaliana
AT2G40540 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16920864-16930863 Arabidopsis thaliana
AT2G40540 10.0kb downstream 10.0kb downstream 13725 true Chr2: 16930864-16944588 Arabidopsis thaliana
AT2G40540 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16934589-16944588 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360900 5261 Brassicaceae View MSA
123829598 5264 Brassicales-Malvales View MSA
124339953 5266 SBM View MSA
124249515 5268 Malvidae View MSA
124064165 5270 Rosid View MSA
123749709 5271 Pentapetalae View MSA
122787905 5272 Eudicot View MSA
122045012 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121310386 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.818        
cufflinks 10.984        
cufflinks 7.241        
cufflinks 10.63        
cufflinks 5.312       Low
cufflinks 13.315       High

0 Strain