Gene : AT2G40600 A. thaliana TAIR10
Defline:  (1 of 3) PF01661 - Macro domain (Macro) Genomic Order:  3444
Name:  ? AT2G40600 Secondary Identifier:  ? PAC:19639109
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40600 0.5kb upstream 0.5kb upstream 2192 true Chr2: 16946870-16949061 Arabidopsis thaliana
AT2G40600 0.5kb upstream 0.5kb upstream 500 false Chr2: 16948562-16949061 Arabidopsis thaliana
AT2G40600 0.5kb downstream 0.5kb downstream 2192 true Chr2: 16946370-16948561 Arabidopsis thaliana
AT2G40600 0.5kb downstream 0.5kb downstream 500 false Chr2: 16946370-16946869 Arabidopsis thaliana
AT2G40600 1.0kb upstream 1.0kb upstream 2692 true Chr2: 16946870-16949561 Arabidopsis thaliana
AT2G40600 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16948562-16949561 Arabidopsis thaliana
AT2G40600 1.0kb downstream 1.0kb downstream 2692 true Chr2: 16945870-16948561 Arabidopsis thaliana
AT2G40600 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16945870-16946869 Arabidopsis thaliana
AT2G40600 2.0kb upstream 2.0kb upstream 3692 true Chr2: 16946870-16950561 Arabidopsis thaliana
AT2G40600 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16948562-16950561 Arabidopsis thaliana
AT2G40600 2.0kb downstream 2.0kb downstream 3692 true Chr2: 16944870-16948561 Arabidopsis thaliana
AT2G40600 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16944870-16946869 Arabidopsis thaliana
AT2G40600 5.0kb upstream 5.0kb upstream 6692 true Chr2: 16946870-16953561 Arabidopsis thaliana
AT2G40600 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16948562-16953561 Arabidopsis thaliana
AT2G40600 5.0kb downstream 5.0kb downstream 6692 true Chr2: 16941870-16948561 Arabidopsis thaliana
AT2G40600 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16941870-16946869 Arabidopsis thaliana
AT2G40600 10.0kb upstream 10.0kb upstream 11692 true Chr2: 16946870-16958561 Arabidopsis thaliana
AT2G40600 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16948562-16958561 Arabidopsis thaliana
AT2G40600 10.0kb downstream 10.0kb downstream 11692 true Chr2: 16936870-16948561 Arabidopsis thaliana
AT2G40600 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16936870-16946869 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366491 5261 Brassicaceae View MSA
123839273 5264 Brassicales-Malvales View MSA
124337612 5266 SBM View MSA
124242045 5268 Malvidae View MSA
124063406 5270 Rosid View MSA
123746303 5271 Pentapetalae View MSA
122790136 5272 Eudicot View MSA
122047973 5273 Angiosperm View MSA
121350961 5274 Embryophyte View MSA
123428110 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.941     High High
cufflinks 13.009        
cufflinks 24.604        
cufflinks 14.95        
cufflinks 29.713     High  
cufflinks 13.217        

0 Strain