Gene : AT2G40400 A. thaliana TAIR10
Defline:  (1 of 2) PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Genomic Order:  3422
Name:  ? AT2G40400 Secondary Identifier:  ? PAC:19638436
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40400 0.5kb upstream 0.5kb upstream 4425 true Chr2: 16868834-16873258 Arabidopsis thaliana
AT2G40400 0.5kb upstream 0.5kb upstream 500 false Chr2: 16868834-16869333 Arabidopsis thaliana
AT2G40400 0.5kb downstream 0.5kb downstream 4425 true Chr2: 16869334-16873758 Arabidopsis thaliana
AT2G40400 0.5kb downstream 0.5kb downstream 500 false Chr2: 16873259-16873758 Arabidopsis thaliana
AT2G40400 1.0kb upstream 1.0kb upstream 4925 true Chr2: 16868334-16873258 Arabidopsis thaliana
AT2G40400 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16868334-16869333 Arabidopsis thaliana
AT2G40400 1.0kb downstream 1.0kb downstream 4925 true Chr2: 16869334-16874258 Arabidopsis thaliana
AT2G40400 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16873259-16874258 Arabidopsis thaliana
AT2G40400 2.0kb upstream 2.0kb upstream 5925 true Chr2: 16867334-16873258 Arabidopsis thaliana
AT2G40400 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16867334-16869333 Arabidopsis thaliana
AT2G40400 2.0kb downstream 2.0kb downstream 5925 true Chr2: 16869334-16875258 Arabidopsis thaliana
AT2G40400 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16873259-16875258 Arabidopsis thaliana
AT2G40400 5.0kb upstream 5.0kb upstream 8925 true Chr2: 16864334-16873258 Arabidopsis thaliana
AT2G40400 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16864334-16869333 Arabidopsis thaliana
AT2G40400 5.0kb downstream 5.0kb downstream 8925 true Chr2: 16869334-16878258 Arabidopsis thaliana
AT2G40400 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16873259-16878258 Arabidopsis thaliana
AT2G40400 10.0kb upstream 10.0kb upstream 13925 true Chr2: 16859334-16873258 Arabidopsis thaliana
AT2G40400 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16859334-16869333 Arabidopsis thaliana
AT2G40400 10.0kb downstream 10.0kb downstream 13925 true Chr2: 16869334-16883258 Arabidopsis thaliana
AT2G40400 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16873259-16883258 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367985 5261 Brassicaceae View MSA
123799461 5264 Brassicales-Malvales View MSA
124296980 5266 SBM View MSA
124148989 5268 Malvidae View MSA
124063708 5270 Rosid View MSA
123737054 5271 Pentapetalae View MSA
122790914 5272 Eudicot View MSA
122041668 5273 Angiosperm View MSA
121345431 5274 Embryophyte View MSA
123380215 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.87        
cufflinks 3.487        
cufflinks 9.764       High
cufflinks 2.895        
cufflinks 8.099       High
cufflinks 2.709        

0 Strain