Gene : AT2G40350 A. thaliana TAIR10
Defline:  (1 of 5) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED Genomic Order:  3417
Name:  ? AT2G40350 Secondary Identifier:  ? PAC:19642965
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40350 0.5kb upstream 0.5kb upstream 974 true Chr2: 16851595-16852568 Arabidopsis thaliana
AT2G40350 0.5kb upstream 0.5kb upstream 500 false Chr2: 16852069-16852568 Arabidopsis thaliana
AT2G40350 0.5kb downstream 0.5kb downstream 974 true Chr2: 16851095-16852068 Arabidopsis thaliana
AT2G40350 0.5kb downstream 0.5kb downstream 500 false Chr2: 16851095-16851594 Arabidopsis thaliana
AT2G40350 1.0kb upstream 1.0kb upstream 1474 true Chr2: 16851595-16853068 Arabidopsis thaliana
AT2G40350 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16852069-16853068 Arabidopsis thaliana
AT2G40350 1.0kb downstream 1.0kb downstream 1474 true Chr2: 16850595-16852068 Arabidopsis thaliana
AT2G40350 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16850595-16851594 Arabidopsis thaliana
AT2G40350 2.0kb upstream 2.0kb upstream 2474 true Chr2: 16851595-16854068 Arabidopsis thaliana
AT2G40350 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16852069-16854068 Arabidopsis thaliana
AT2G40350 2.0kb downstream 2.0kb downstream 2474 true Chr2: 16849595-16852068 Arabidopsis thaliana
AT2G40350 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16849595-16851594 Arabidopsis thaliana
AT2G40350 5.0kb upstream 5.0kb upstream 5474 true Chr2: 16851595-16857068 Arabidopsis thaliana
AT2G40350 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16852069-16857068 Arabidopsis thaliana
AT2G40350 5.0kb downstream 5.0kb downstream 5474 true Chr2: 16846595-16852068 Arabidopsis thaliana
AT2G40350 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16846595-16851594 Arabidopsis thaliana
AT2G40350 10.0kb upstream 10.0kb upstream 10474 true Chr2: 16851595-16862068 Arabidopsis thaliana
AT2G40350 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16852069-16862068 Arabidopsis thaliana
AT2G40350 10.0kb downstream 10.0kb downstream 10474 true Chr2: 16841595-16852068 Arabidopsis thaliana
AT2G40350 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16841595-16851594 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329587 5261 Brassicaceae Singleton cluster - no MSA
123770884 5264 Brassicales-Malvales Singleton cluster - no MSA
124269419 5266 SBM Singleton cluster - no MSA
124125561 5268 Malvidae Singleton cluster - no MSA
123854526 5270 Rosid Singleton cluster - no MSA
123752289 5271 Pentapetalae View MSA
122797550 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306       High
cufflinks 0.128     Low  
cufflinks 0.141     Low  
cufflinks 0.098     Low  
cufflinks 0.317       High
cufflinks 0.068     Low Low

0 Strain