Gene : AT2G40260 A. thaliana TAIR10
Defline:  (1 of 240) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Genomic Order:  3407
Name:  ? AT2G40260 Secondary Identifier:  ? PAC:19640720
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40260 0.5kb upstream 0.5kb upstream 2156 true Chr2: 16816818-16818973 Arabidopsis thaliana
AT2G40260 0.5kb upstream 0.5kb upstream 500 false Chr2: 16818474-16818973 Arabidopsis thaliana
AT2G40260 0.5kb downstream 0.5kb downstream 2156 true Chr2: 16816318-16818473 Arabidopsis thaliana
AT2G40260 0.5kb downstream 0.5kb downstream 500 false Chr2: 16816318-16816817 Arabidopsis thaliana
AT2G40260 1.0kb upstream 1.0kb upstream 2656 true Chr2: 16816818-16819473 Arabidopsis thaliana
AT2G40260 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16818474-16819473 Arabidopsis thaliana
AT2G40260 1.0kb downstream 1.0kb downstream 2656 true Chr2: 16815818-16818473 Arabidopsis thaliana
AT2G40260 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16815818-16816817 Arabidopsis thaliana
AT2G40260 2.0kb upstream 2.0kb upstream 3656 true Chr2: 16816818-16820473 Arabidopsis thaliana
AT2G40260 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16818474-16820473 Arabidopsis thaliana
AT2G40260 2.0kb downstream 2.0kb downstream 3656 true Chr2: 16814818-16818473 Arabidopsis thaliana
AT2G40260 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16814818-16816817 Arabidopsis thaliana
AT2G40260 5.0kb upstream 5.0kb upstream 6656 true Chr2: 16816818-16823473 Arabidopsis thaliana
AT2G40260 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16818474-16823473 Arabidopsis thaliana
AT2G40260 5.0kb downstream 5.0kb downstream 6656 true Chr2: 16811818-16818473 Arabidopsis thaliana
AT2G40260 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16811818-16816817 Arabidopsis thaliana
AT2G40260 10.0kb upstream 10.0kb upstream 11656 true Chr2: 16816818-16828473 Arabidopsis thaliana
AT2G40260 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16818474-16828473 Arabidopsis thaliana
AT2G40260 10.0kb downstream 10.0kb downstream 11656 true Chr2: 16806818-16818473 Arabidopsis thaliana
AT2G40260 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16806818-16816817 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379092 5261 Brassicaceae View MSA
123829480 5264 Brassicales-Malvales View MSA
124321601 5266 SBM View MSA
124253520 5268 Malvidae View MSA
124069267 5270 Rosid View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.932        
cufflinks 1.869        
cufflinks 1.499        
cufflinks 3.937       High
cufflinks 1.555        
cufflinks 3.313       High

0 Strain