Gene : AT2G39740 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12271:SF40 - POLY(A) RNA POLYMERASE GLD2 Genomic Order:  3342
Name:  ? AT2G39740 Secondary Identifier:  ? PAC:19639701
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G39740 0.5kb upstream 0.5kb upstream 3869 true Chr2: 16575252-16579120 Arabidopsis thaliana
AT2G39740 0.5kb upstream 0.5kb upstream 500 false Chr2: 16575252-16575751 Arabidopsis thaliana
AT2G39740 0.5kb downstream 0.5kb downstream 3869 true Chr2: 16575752-16579620 Arabidopsis thaliana
AT2G39740 0.5kb downstream 0.5kb downstream 500 false Chr2: 16579121-16579620 Arabidopsis thaliana
AT2G39740 1.0kb upstream 1.0kb upstream 4369 true Chr2: 16574752-16579120 Arabidopsis thaliana
AT2G39740 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16574752-16575751 Arabidopsis thaliana
AT2G39740 1.0kb downstream 1.0kb downstream 4369 true Chr2: 16575752-16580120 Arabidopsis thaliana
AT2G39740 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16579121-16580120 Arabidopsis thaliana
AT2G39740 2.0kb upstream 2.0kb upstream 5369 true Chr2: 16573752-16579120 Arabidopsis thaliana
AT2G39740 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16573752-16575751 Arabidopsis thaliana
AT2G39740 2.0kb downstream 2.0kb downstream 5369 true Chr2: 16575752-16581120 Arabidopsis thaliana
AT2G39740 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16579121-16581120 Arabidopsis thaliana
AT2G39740 5.0kb upstream 5.0kb upstream 8369 true Chr2: 16570752-16579120 Arabidopsis thaliana
AT2G39740 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16570752-16575751 Arabidopsis thaliana
AT2G39740 5.0kb downstream 5.0kb downstream 8369 true Chr2: 16575752-16584120 Arabidopsis thaliana
AT2G39740 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16579121-16584120 Arabidopsis thaliana
AT2G39740 10.0kb upstream 10.0kb upstream 13369 true Chr2: 16565752-16579120 Arabidopsis thaliana
AT2G39740 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16565752-16575751 Arabidopsis thaliana
AT2G39740 10.0kb downstream 10.0kb downstream 13369 true Chr2: 16575752-16589120 Arabidopsis thaliana
AT2G39740 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16579121-16589120 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370896 5261 Brassicaceae View MSA
123828264 5264 Brassicales-Malvales View MSA
124339214 5266 SBM View MSA
124239853 5268 Malvidae View MSA
124063815 5270 Rosid View MSA
123736684 5271 Pentapetalae View MSA
122788998 5272 Eudicot View MSA
122048124 5273 Angiosperm View MSA
121349323 5274 Embryophyte View MSA
123428586 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.322       High
cufflinks 3.443        
cufflinks 3.837        
cufflinks 3.722        
cufflinks 4.617        
cufflinks 3.512        

0 Strain