Gene : AT2G39480 A. thaliana TAIR10
Defline:  (1 of 21) K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Genomic Order:  3316
Name:  ? AT2G39480 Secondary Identifier:  ? PAC:19642590
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G39480 0.5kb upstream 0.5kb upstream 7748 true Chr2: 16477792-16485539 Arabidopsis thaliana
AT2G39480 0.5kb upstream 0.5kb upstream 500 false Chr2: 16485040-16485539 Arabidopsis thaliana
AT2G39480 0.5kb downstream 0.5kb downstream 7748 true Chr2: 16477292-16485039 Arabidopsis thaliana
AT2G39480 0.5kb downstream 0.5kb downstream 500 false Chr2: 16477292-16477791 Arabidopsis thaliana
AT2G39480 1.0kb upstream 1.0kb upstream 8248 true Chr2: 16477792-16486039 Arabidopsis thaliana
AT2G39480 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16485040-16486039 Arabidopsis thaliana
AT2G39480 1.0kb downstream 1.0kb downstream 8248 true Chr2: 16476792-16485039 Arabidopsis thaliana
AT2G39480 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16476792-16477791 Arabidopsis thaliana
AT2G39480 2.0kb upstream 2.0kb upstream 9248 true Chr2: 16477792-16487039 Arabidopsis thaliana
AT2G39480 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16485040-16487039 Arabidopsis thaliana
AT2G39480 2.0kb downstream 2.0kb downstream 9248 true Chr2: 16475792-16485039 Arabidopsis thaliana
AT2G39480 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16475792-16477791 Arabidopsis thaliana
AT2G39480 5.0kb upstream 5.0kb upstream 12248 true Chr2: 16477792-16490039 Arabidopsis thaliana
AT2G39480 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16485040-16490039 Arabidopsis thaliana
AT2G39480 5.0kb downstream 5.0kb downstream 12248 true Chr2: 16472792-16485039 Arabidopsis thaliana
AT2G39480 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16472792-16477791 Arabidopsis thaliana
AT2G39480 10.0kb upstream 10.0kb upstream 17248 true Chr2: 16477792-16495039 Arabidopsis thaliana
AT2G39480 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16485040-16495039 Arabidopsis thaliana
AT2G39480 10.0kb downstream 10.0kb downstream 17248 true Chr2: 16467792-16485039 Arabidopsis thaliana
AT2G39480 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16467792-16477791 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360918 5261 Brassicaceae View MSA
123837411 5264 Brassicales-Malvales View MSA
124338738 5266 SBM View MSA
124239270 5268 Malvidae View MSA
124072501 5270 Rosid View MSA
123739831 5271 Pentapetalae View MSA
122793559 5272 Eudicot View MSA
122043671 5273 Angiosperm View MSA
121348090 5274 Embryophyte View MSA
123380726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.58        
cufflinks 9.713        
cufflinks 5.185       Low
cufflinks 9.355        
cufflinks 5.802       Low
cufflinks 10.943        

0 Strain