Gene : AT2G39435 A. thaliana TAIR10
Defline:  (1 of 2) PTHR21726:SF49 - PHOSPHATIDYLINOSITOL N-ACETYGLUCOSAMINLYTRANSFERASE SUBUNIT P-LIKE PROTEIN Genomic Order:  3310
Name:  ? AT2G39435 Secondary Identifier:  ? PAC:19639408
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G39435 0.5kb upstream 0.5kb upstream 3028 true Chr2: 16464414-16467441 Arabidopsis thaliana
AT2G39435 0.5kb upstream 0.5kb upstream 500 false Chr2: 16466942-16467441 Arabidopsis thaliana
AT2G39435 0.5kb downstream 0.5kb downstream 3028 true Chr2: 16463914-16466941 Arabidopsis thaliana
AT2G39435 0.5kb downstream 0.5kb downstream 500 false Chr2: 16463914-16464413 Arabidopsis thaliana
AT2G39435 1.0kb upstream 1.0kb upstream 3528 true Chr2: 16464414-16467941 Arabidopsis thaliana
AT2G39435 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16466942-16467941 Arabidopsis thaliana
AT2G39435 1.0kb downstream 1.0kb downstream 3528 true Chr2: 16463414-16466941 Arabidopsis thaliana
AT2G39435 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16463414-16464413 Arabidopsis thaliana
AT2G39435 2.0kb upstream 2.0kb upstream 4528 true Chr2: 16464414-16468941 Arabidopsis thaliana
AT2G39435 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16466942-16468941 Arabidopsis thaliana
AT2G39435 2.0kb downstream 2.0kb downstream 4528 true Chr2: 16462414-16466941 Arabidopsis thaliana
AT2G39435 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16462414-16464413 Arabidopsis thaliana
AT2G39435 5.0kb upstream 5.0kb upstream 7528 true Chr2: 16464414-16471941 Arabidopsis thaliana
AT2G39435 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16466942-16471941 Arabidopsis thaliana
AT2G39435 5.0kb downstream 5.0kb downstream 7528 true Chr2: 16459414-16466941 Arabidopsis thaliana
AT2G39435 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16459414-16464413 Arabidopsis thaliana
AT2G39435 10.0kb upstream 10.0kb upstream 12528 true Chr2: 16464414-16476941 Arabidopsis thaliana
AT2G39435 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16466942-16476941 Arabidopsis thaliana
AT2G39435 10.0kb downstream 10.0kb downstream 12528 true Chr2: 16454414-16466941 Arabidopsis thaliana
AT2G39435 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16454414-16464413 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361947 5261 Brassicaceae View MSA
123798277 5264 Brassicales-Malvales View MSA
124295941 5266 SBM View MSA
124148240 5268 Malvidae View MSA
123874279 5270 Rosid View MSA
123752658 5271 Pentapetalae View MSA
122796149 5272 Eudicot View MSA
122047925 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.109        
cufflinks 3.796        
cufflinks 1.385       Low
cufflinks 3.632        
cufflinks 1.37       Low
cufflinks 3.91        

0 Strain