Gene : AT2G38800 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33923:SF2 - CALMODULIN-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  3248
Name:  ? AT2G38800 Secondary Identifier:  ? PAC:19640844
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38800 0.5kb upstream 0.5kb upstream 2661 true Chr2: 16216499-16219159 Arabidopsis thaliana
AT2G38800 0.5kb upstream 0.5kb upstream 500 false Chr2: 16216499-16216998 Arabidopsis thaliana
AT2G38800 0.5kb downstream 0.5kb downstream 2661 true Chr2: 16216999-16219659 Arabidopsis thaliana
AT2G38800 0.5kb downstream 0.5kb downstream 500 false Chr2: 16219160-16219659 Arabidopsis thaliana
AT2G38800 1.0kb upstream 1.0kb upstream 3161 true Chr2: 16215999-16219159 Arabidopsis thaliana
AT2G38800 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16215999-16216998 Arabidopsis thaliana
AT2G38800 1.0kb downstream 1.0kb downstream 3161 true Chr2: 16216999-16220159 Arabidopsis thaliana
AT2G38800 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16219160-16220159 Arabidopsis thaliana
AT2G38800 2.0kb upstream 2.0kb upstream 4161 true Chr2: 16214999-16219159 Arabidopsis thaliana
AT2G38800 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16214999-16216998 Arabidopsis thaliana
AT2G38800 2.0kb downstream 2.0kb downstream 4161 true Chr2: 16216999-16221159 Arabidopsis thaliana
AT2G38800 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16219160-16221159 Arabidopsis thaliana
AT2G38800 5.0kb upstream 5.0kb upstream 7161 true Chr2: 16211999-16219159 Arabidopsis thaliana
AT2G38800 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16211999-16216998 Arabidopsis thaliana
AT2G38800 5.0kb downstream 5.0kb downstream 7161 true Chr2: 16216999-16224159 Arabidopsis thaliana
AT2G38800 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16219160-16224159 Arabidopsis thaliana
AT2G38800 10.0kb upstream 10.0kb upstream 12161 true Chr2: 16206999-16219159 Arabidopsis thaliana
AT2G38800 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16206999-16216998 Arabidopsis thaliana
AT2G38800 10.0kb downstream 10.0kb downstream 12161 true Chr2: 16216999-16229159 Arabidopsis thaliana
AT2G38800 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16219160-16229159 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375593 5261 Brassicaceae View MSA
123835168 5264 Brassicales-Malvales View MSA
124322012 5266 SBM View MSA
124248809 5268 Malvidae View MSA
124070839 5270 Rosid View MSA
123751830 5271 Pentapetalae View MSA
122794379 5272 Eudicot View MSA
122048644 5273 Angiosperm View MSA
121311054 5274 Embryophyte View MSA
123348408 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.417     High Low
cufflinks 415.689     High High
cufflinks 64.92     High  
cufflinks 350.614     High  
cufflinks 67.072     High  
cufflinks 285.462     High  

0 Strain