Gene : AT2G38780 A. thaliana TAIR10
Genomic Order:  3246 Name:  ? AT2G38780
Secondary Identifier:  ? PAC:19643168
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38780 0.5kb upstream 0.5kb upstream 3876 true Chr2: 16210357-16214232 Arabidopsis thaliana
AT2G38780 0.5kb upstream 0.5kb upstream 500 false Chr2: 16210357-16210856 Arabidopsis thaliana
AT2G38780 0.5kb downstream 0.5kb downstream 3876 true Chr2: 16210857-16214732 Arabidopsis thaliana
AT2G38780 0.5kb downstream 0.5kb downstream 500 false Chr2: 16214233-16214732 Arabidopsis thaliana
AT2G38780 1.0kb upstream 1.0kb upstream 4376 true Chr2: 16209857-16214232 Arabidopsis thaliana
AT2G38780 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16209857-16210856 Arabidopsis thaliana
AT2G38780 1.0kb downstream 1.0kb downstream 4376 true Chr2: 16210857-16215232 Arabidopsis thaliana
AT2G38780 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16214233-16215232 Arabidopsis thaliana
AT2G38780 2.0kb upstream 2.0kb upstream 5376 true Chr2: 16208857-16214232 Arabidopsis thaliana
AT2G38780 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16208857-16210856 Arabidopsis thaliana
AT2G38780 2.0kb downstream 2.0kb downstream 5376 true Chr2: 16210857-16216232 Arabidopsis thaliana
AT2G38780 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16214233-16216232 Arabidopsis thaliana
AT2G38780 5.0kb upstream 5.0kb upstream 8376 true Chr2: 16205857-16214232 Arabidopsis thaliana
AT2G38780 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16205857-16210856 Arabidopsis thaliana
AT2G38780 5.0kb downstream 5.0kb downstream 8376 true Chr2: 16210857-16219232 Arabidopsis thaliana
AT2G38780 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16214233-16219232 Arabidopsis thaliana
AT2G38780 10.0kb upstream 10.0kb upstream 13376 true Chr2: 16200857-16214232 Arabidopsis thaliana
AT2G38780 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16200857-16210856 Arabidopsis thaliana
AT2G38780 10.0kb downstream 10.0kb downstream 13376 true Chr2: 16210857-16224232 Arabidopsis thaliana
AT2G38780 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16214233-16224232 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376967 5261 Brassicaceae View MSA
123835143 5264 Brassicales-Malvales View MSA
124344027 5266 SBM View MSA
124237846 5268 Malvidae View MSA
124061449 5270 Rosid View MSA
123751529 5271 Pentapetalae View MSA
122788340 5272 Eudicot View MSA
122046411 5273 Angiosperm View MSA
121347795 5274 Embryophyte View MSA
123426242 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.766        
cufflinks 3.181        
cufflinks 6.995       High
cufflinks 2.867        
cufflinks 5.885        
cufflinks 2.65       Low

0 Strain