Gene : AT2G38610 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11208//PTHR11208:SF59 - RNA-BINDING PROTEIN RELATED // SUBFAMILY NOT NAMED Genomic Order:  3227
Name:  ? AT2G38610 Secondary Identifier:  ? PAC:19640970
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38610 0.5kb upstream 0.5kb upstream 3261 true Chr2: 16147113-16150373 Arabidopsis thaliana
AT2G38610 0.5kb upstream 0.5kb upstream 500 false Chr2: 16149874-16150373 Arabidopsis thaliana
AT2G38610 0.5kb downstream 0.5kb downstream 3261 true Chr2: 16146613-16149873 Arabidopsis thaliana
AT2G38610 0.5kb downstream 0.5kb downstream 500 false Chr2: 16146613-16147112 Arabidopsis thaliana
AT2G38610 1.0kb upstream 1.0kb upstream 3761 true Chr2: 16147113-16150873 Arabidopsis thaliana
AT2G38610 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16149874-16150873 Arabidopsis thaliana
AT2G38610 1.0kb downstream 1.0kb downstream 3761 true Chr2: 16146113-16149873 Arabidopsis thaliana
AT2G38610 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16146113-16147112 Arabidopsis thaliana
AT2G38610 2.0kb upstream 2.0kb upstream 4761 true Chr2: 16147113-16151873 Arabidopsis thaliana
AT2G38610 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16149874-16151873 Arabidopsis thaliana
AT2G38610 2.0kb downstream 2.0kb downstream 4761 true Chr2: 16145113-16149873 Arabidopsis thaliana
AT2G38610 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16145113-16147112 Arabidopsis thaliana
AT2G38610 5.0kb upstream 5.0kb upstream 7761 true Chr2: 16147113-16154873 Arabidopsis thaliana
AT2G38610 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16149874-16154873 Arabidopsis thaliana
AT2G38610 5.0kb downstream 5.0kb downstream 7761 true Chr2: 16142113-16149873 Arabidopsis thaliana
AT2G38610 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16142113-16147112 Arabidopsis thaliana
AT2G38610 10.0kb upstream 10.0kb upstream 12761 true Chr2: 16147113-16159873 Arabidopsis thaliana
AT2G38610 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16149874-16159873 Arabidopsis thaliana
AT2G38610 10.0kb downstream 10.0kb downstream 12761 true Chr2: 16137113-16149873 Arabidopsis thaliana
AT2G38610 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16137113-16147112 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371428 5261 Brassicaceae View MSA
123836230 5264 Brassicales-Malvales View MSA
124337389 5266 SBM View MSA
124240023 5268 Malvidae View MSA
124074646 5270 Rosid View MSA
123752463 5271 Pentapetalae View MSA
122791052 5272 Eudicot View MSA
122045750 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.728        
cufflinks 7.047        
cufflinks 4.77       Low
cufflinks 6.266        
cufflinks 5.189        
cufflinks 8.208       High

0 Strain