Gene : AT2G38550 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12668:SF19 - NON-GREEN PLASTID INNER ENVELOPE MEMBRANE PROTEIN-RELATED Genomic Order:  3221
Name:  ? AT2G38550 Secondary Identifier:  ? PAC:19640337
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38550 0.5kb upstream 0.5kb upstream 2910 true Chr2: 16131506-16134415 Arabidopsis thaliana
AT2G38550 0.5kb upstream 0.5kb upstream 500 false Chr2: 16131506-16132005 Arabidopsis thaliana
AT2G38550 0.5kb downstream 0.5kb downstream 2910 true Chr2: 16132006-16134915 Arabidopsis thaliana
AT2G38550 0.5kb downstream 0.5kb downstream 500 false Chr2: 16134416-16134915 Arabidopsis thaliana
AT2G38550 1.0kb upstream 1.0kb upstream 3410 true Chr2: 16131006-16134415 Arabidopsis thaliana
AT2G38550 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16131006-16132005 Arabidopsis thaliana
AT2G38550 1.0kb downstream 1.0kb downstream 3410 true Chr2: 16132006-16135415 Arabidopsis thaliana
AT2G38550 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16134416-16135415 Arabidopsis thaliana
AT2G38550 2.0kb upstream 2.0kb upstream 4410 true Chr2: 16130006-16134415 Arabidopsis thaliana
AT2G38550 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16130006-16132005 Arabidopsis thaliana
AT2G38550 2.0kb downstream 2.0kb downstream 4410 true Chr2: 16132006-16136415 Arabidopsis thaliana
AT2G38550 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16134416-16136415 Arabidopsis thaliana
AT2G38550 5.0kb upstream 5.0kb upstream 7410 true Chr2: 16127006-16134415 Arabidopsis thaliana
AT2G38550 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16127006-16132005 Arabidopsis thaliana
AT2G38550 5.0kb downstream 5.0kb downstream 7410 true Chr2: 16132006-16139415 Arabidopsis thaliana
AT2G38550 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16134416-16139415 Arabidopsis thaliana
AT2G38550 10.0kb upstream 10.0kb upstream 12410 true Chr2: 16122006-16134415 Arabidopsis thaliana
AT2G38550 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16122006-16132005 Arabidopsis thaliana
AT2G38550 10.0kb downstream 10.0kb downstream 12410 true Chr2: 16132006-16144415 Arabidopsis thaliana
AT2G38550 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16134416-16144415 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360601 5261 Brassicaceae View MSA
123832732 5264 Brassicales-Malvales View MSA
124343486 5266 SBM View MSA
124243339 5268 Malvidae View MSA
124066225 5270 Rosid View MSA
123738193 5271 Pentapetalae View MSA
122789791 5272 Eudicot View MSA
122046844 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.964     High High
cufflinks 24.105        
cufflinks 26.773     High  
cufflinks 24.745        
cufflinks 23.703        
cufflinks 22.8       Low

0 Strain