Gene : FAC1 A. thaliana TAIR10
Primary Identifier:  ? AT2G38280 Defline:  (1 of 1) 3.5.4.17 - Adenosine-phosphate deaminase
Genomic Order:  3191 Name:  ? AT2G38280
Secondary Identifier:  ? PAC:19641163
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6596 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38280 0.5kb upstream 0.5kb upstream 5929 true Chr2: 16033448-16039376 Arabidopsis thaliana
AT2G38280 0.5kb upstream 0.5kb upstream 500 false Chr2: 16038877-16039376 Arabidopsis thaliana
AT2G38280 0.5kb downstream 0.5kb downstream 5929 true Chr2: 16032948-16038876 Arabidopsis thaliana
AT2G38280 0.5kb downstream 0.5kb downstream 500 false Chr2: 16032948-16033447 Arabidopsis thaliana
AT2G38280 1.0kb upstream 1.0kb upstream 6429 true Chr2: 16033448-16039876 Arabidopsis thaliana
AT2G38280 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16038877-16039876 Arabidopsis thaliana
AT2G38280 1.0kb downstream 1.0kb downstream 6429 true Chr2: 16032448-16038876 Arabidopsis thaliana
AT2G38280 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16032448-16033447 Arabidopsis thaliana
AT2G38280 2.0kb upstream 2.0kb upstream 7429 true Chr2: 16033448-16040876 Arabidopsis thaliana
AT2G38280 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16038877-16040876 Arabidopsis thaliana
AT2G38280 2.0kb downstream 2.0kb downstream 7429 true Chr2: 16031448-16038876 Arabidopsis thaliana
AT2G38280 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16031448-16033447 Arabidopsis thaliana
AT2G38280 5.0kb upstream 5.0kb upstream 10429 true Chr2: 16033448-16043876 Arabidopsis thaliana
AT2G38280 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16038877-16043876 Arabidopsis thaliana
AT2G38280 5.0kb downstream 5.0kb downstream 10429 true Chr2: 16028448-16038876 Arabidopsis thaliana
AT2G38280 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16028448-16033447 Arabidopsis thaliana
AT2G38280 10.0kb upstream 10.0kb upstream 15429 true Chr2: 16033448-16048876 Arabidopsis thaliana
AT2G38280 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16038877-16048876 Arabidopsis thaliana
AT2G38280 10.0kb downstream 10.0kb downstream 15429 true Chr2: 16023448-16038876 Arabidopsis thaliana
AT2G38280 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16023448-16033447 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365523 5261 Brassicaceae View MSA
123840306 5264 Brassicales-Malvales View MSA
124337133 5266 SBM View MSA
124243054 5268 Malvidae View MSA
124067262 5270 Rosid View MSA
123738882 5271 Pentapetalae View MSA
122789679 5272 Eudicot View MSA
122046133 5273 Angiosperm View MSA
121347904 5274 Embryophyte View MSA
123428411 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.461        
cufflinks 6.786        
cufflinks 4.027        
cufflinks 7.716       High
cufflinks 3.862       Low
cufflinks 7.036        

0 Strain