Gene : AT2G38070 A. thaliana TAIR10
Defline:  (1 of 7) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  3169
Name:  ? AT2G38070 Secondary Identifier:  ? PAC:19643472
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38070 0.5kb upstream 0.5kb upstream 2704 true Chr2: 15928091-15930794 Arabidopsis thaliana
AT2G38070 0.5kb upstream 0.5kb upstream 500 false Chr2: 15928091-15928590 Arabidopsis thaliana
AT2G38070 0.5kb downstream 0.5kb downstream 2704 true Chr2: 15928591-15931294 Arabidopsis thaliana
AT2G38070 0.5kb downstream 0.5kb downstream 500 false Chr2: 15930795-15931294 Arabidopsis thaliana
AT2G38070 1.0kb upstream 1.0kb upstream 3204 true Chr2: 15927591-15930794 Arabidopsis thaliana
AT2G38070 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15927591-15928590 Arabidopsis thaliana
AT2G38070 1.0kb downstream 1.0kb downstream 3204 true Chr2: 15928591-15931794 Arabidopsis thaliana
AT2G38070 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15930795-15931794 Arabidopsis thaliana
AT2G38070 2.0kb upstream 2.0kb upstream 4204 true Chr2: 15926591-15930794 Arabidopsis thaliana
AT2G38070 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15926591-15928590 Arabidopsis thaliana
AT2G38070 2.0kb downstream 2.0kb downstream 4204 true Chr2: 15928591-15932794 Arabidopsis thaliana
AT2G38070 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15930795-15932794 Arabidopsis thaliana
AT2G38070 5.0kb upstream 5.0kb upstream 7204 true Chr2: 15923591-15930794 Arabidopsis thaliana
AT2G38070 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15923591-15928590 Arabidopsis thaliana
AT2G38070 5.0kb downstream 5.0kb downstream 7204 true Chr2: 15928591-15935794 Arabidopsis thaliana
AT2G38070 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15930795-15935794 Arabidopsis thaliana
AT2G38070 10.0kb upstream 10.0kb upstream 12204 true Chr2: 15918591-15930794 Arabidopsis thaliana
AT2G38070 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15918591-15928590 Arabidopsis thaliana
AT2G38070 10.0kb downstream 10.0kb downstream 12204 true Chr2: 15928591-15940794 Arabidopsis thaliana
AT2G38070 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15930795-15940794 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367818 5261 Brassicaceae View MSA
123799428 5264 Brassicales-Malvales View MSA
124296950 5266 SBM View MSA
124148966 5268 Malvidae View MSA
124067107 5270 Rosid View MSA
123750530 5271 Pentapetalae View MSA
122796872 5272 Eudicot View MSA
122051707 5273 Angiosperm View MSA
121312622 5274 Embryophyte View MSA
123349777 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.093        
cufflinks 3.034        
cufflinks 0.825        
cufflinks 3.171        
cufflinks 0.733       Low
cufflinks 3.203        

0 Strain