Gene : AT2G38000 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15852//PTHR15852:SF20 - FAMILY NOT NAMED // CHAPERONE PROTEIN DNAJ-LIKE PROTEIN Genomic Order:  3162
Name:  ? AT2G38000 Secondary Identifier:  ? PAC:19641454
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38000 0.5kb upstream 0.5kb upstream 2767 true Chr2: 15903125-15905891 Arabidopsis thaliana
AT2G38000 0.5kb upstream 0.5kb upstream 500 false Chr2: 15905392-15905891 Arabidopsis thaliana
AT2G38000 0.5kb downstream 0.5kb downstream 2767 true Chr2: 15902625-15905391 Arabidopsis thaliana
AT2G38000 0.5kb downstream 0.5kb downstream 500 false Chr2: 15902625-15903124 Arabidopsis thaliana
AT2G38000 1.0kb upstream 1.0kb upstream 3267 true Chr2: 15903125-15906391 Arabidopsis thaliana
AT2G38000 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15905392-15906391 Arabidopsis thaliana
AT2G38000 1.0kb downstream 1.0kb downstream 3267 true Chr2: 15902125-15905391 Arabidopsis thaliana
AT2G38000 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15902125-15903124 Arabidopsis thaliana
AT2G38000 2.0kb upstream 2.0kb upstream 4267 true Chr2: 15903125-15907391 Arabidopsis thaliana
AT2G38000 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15905392-15907391 Arabidopsis thaliana
AT2G38000 2.0kb downstream 2.0kb downstream 4267 true Chr2: 15901125-15905391 Arabidopsis thaliana
AT2G38000 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15901125-15903124 Arabidopsis thaliana
AT2G38000 5.0kb upstream 5.0kb upstream 7267 true Chr2: 15903125-15910391 Arabidopsis thaliana
AT2G38000 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15905392-15910391 Arabidopsis thaliana
AT2G38000 5.0kb downstream 5.0kb downstream 7267 true Chr2: 15898125-15905391 Arabidopsis thaliana
AT2G38000 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15898125-15903124 Arabidopsis thaliana
AT2G38000 10.0kb upstream 10.0kb upstream 12267 true Chr2: 15903125-15915391 Arabidopsis thaliana
AT2G38000 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15905392-15915391 Arabidopsis thaliana
AT2G38000 10.0kb downstream 10.0kb downstream 12267 true Chr2: 15893125-15905391 Arabidopsis thaliana
AT2G38000 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15893125-15903124 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373613 5261 Brassicaceae View MSA
123832662 5264 Brassicales-Malvales View MSA
124345451 5266 SBM View MSA
124242869 5268 Malvidae View MSA
124067925 5270 Rosid View MSA
123738521 5271 Pentapetalae View MSA
122790446 5272 Eudicot View MSA
122044241 5273 Angiosperm View MSA
121346623 5274 Embryophyte View MSA
123380417 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.438        
cufflinks 10.726        
cufflinks 11.233        
cufflinks 12.498        
cufflinks 14.874       High
cufflinks 9.775       Low

0 Strain