Gene : AT2G37880 A. thaliana TAIR10
Defline:  (1 of 12) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  3148
Name:  ? AT2G37880 Secondary Identifier:  ? PAC:19638977
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G37880 0.5kb upstream 0.5kb upstream 1486 true Chr2: 15860133-15861618 Arabidopsis thaliana
AT2G37880 0.5kb upstream 0.5kb upstream 500 false Chr2: 15860133-15860632 Arabidopsis thaliana
AT2G37880 0.5kb downstream 0.5kb downstream 1486 true Chr2: 15860633-15862118 Arabidopsis thaliana
AT2G37880 0.5kb downstream 0.5kb downstream 500 false Chr2: 15861619-15862118 Arabidopsis thaliana
AT2G37880 1.0kb upstream 1.0kb upstream 1986 true Chr2: 15859633-15861618 Arabidopsis thaliana
AT2G37880 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15859633-15860632 Arabidopsis thaliana
AT2G37880 1.0kb downstream 1.0kb downstream 1986 true Chr2: 15860633-15862618 Arabidopsis thaliana
AT2G37880 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15861619-15862618 Arabidopsis thaliana
AT2G37880 2.0kb upstream 2.0kb upstream 2986 true Chr2: 15858633-15861618 Arabidopsis thaliana
AT2G37880 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15858633-15860632 Arabidopsis thaliana
AT2G37880 2.0kb downstream 2.0kb downstream 2986 true Chr2: 15860633-15863618 Arabidopsis thaliana
AT2G37880 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15861619-15863618 Arabidopsis thaliana
AT2G37880 5.0kb upstream 5.0kb upstream 5986 true Chr2: 15855633-15861618 Arabidopsis thaliana
AT2G37880 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15855633-15860632 Arabidopsis thaliana
AT2G37880 5.0kb downstream 5.0kb downstream 5986 true Chr2: 15860633-15866618 Arabidopsis thaliana
AT2G37880 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15861619-15866618 Arabidopsis thaliana
AT2G37880 10.0kb upstream 10.0kb upstream 10986 true Chr2: 15850633-15861618 Arabidopsis thaliana
AT2G37880 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15850633-15860632 Arabidopsis thaliana
AT2G37880 10.0kb downstream 10.0kb downstream 10986 true Chr2: 15860633-15871618 Arabidopsis thaliana
AT2G37880 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15861619-15871618 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365539 5261 Brassicaceae View MSA
123840255 5264 Brassicales-Malvales View MSA
124337458 5266 SBM View MSA
124252626 5268 Malvidae View MSA
124068431 5270 Rosid View MSA
123751387 5271 Pentapetalae View MSA
122796767 5272 Eudicot View MSA
122047033 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.625        
cufflinks 0.584        
cufflinks 0.572        
cufflinks 0.696        
cufflinks 0.318       Low
cufflinks 0.336     Low Low

0 Strain