Gene : AT2G37900 A. thaliana TAIR10
Defline:  (1 of 3) PTHR11654:SF79 - PROTEIN NRT1/ PTR FAMILY 5.5-RELATED Genomic Order:  3150
Name:  ? AT2G37900 Secondary Identifier:  ? PAC:19643379
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G37900 0.5kb upstream 0.5kb upstream 2513 true Chr2: 15864396-15866908 Arabidopsis thaliana
AT2G37900 0.5kb upstream 0.5kb upstream 500 false Chr2: 15866409-15866908 Arabidopsis thaliana
AT2G37900 0.5kb downstream 0.5kb downstream 2513 true Chr2: 15863896-15866408 Arabidopsis thaliana
AT2G37900 0.5kb downstream 0.5kb downstream 500 false Chr2: 15863896-15864395 Arabidopsis thaliana
AT2G37900 1.0kb upstream 1.0kb upstream 3013 true Chr2: 15864396-15867408 Arabidopsis thaliana
AT2G37900 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15866409-15867408 Arabidopsis thaliana
AT2G37900 1.0kb downstream 1.0kb downstream 3013 true Chr2: 15863396-15866408 Arabidopsis thaliana
AT2G37900 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15863396-15864395 Arabidopsis thaliana
AT2G37900 2.0kb upstream 2.0kb upstream 4013 true Chr2: 15864396-15868408 Arabidopsis thaliana
AT2G37900 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15866409-15868408 Arabidopsis thaliana
AT2G37900 2.0kb downstream 2.0kb downstream 4013 true Chr2: 15862396-15866408 Arabidopsis thaliana
AT2G37900 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15862396-15864395 Arabidopsis thaliana
AT2G37900 5.0kb upstream 5.0kb upstream 7013 true Chr2: 15864396-15871408 Arabidopsis thaliana
AT2G37900 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15866409-15871408 Arabidopsis thaliana
AT2G37900 5.0kb downstream 5.0kb downstream 7013 true Chr2: 15859396-15866408 Arabidopsis thaliana
AT2G37900 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15859396-15864395 Arabidopsis thaliana
AT2G37900 10.0kb upstream 10.0kb upstream 12013 true Chr2: 15864396-15876408 Arabidopsis thaliana
AT2G37900 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15866409-15876408 Arabidopsis thaliana
AT2G37900 10.0kb downstream 10.0kb downstream 12013 true Chr2: 15854396-15866408 Arabidopsis thaliana
AT2G37900 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15854396-15864395 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363055 5261 Brassicaceae View MSA
123835784 5264 Brassicales-Malvales View MSA
124345735 5266 SBM View MSA
124250834 5268 Malvidae View MSA
124072261 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.484       Low
cufflinks 21.899       High
cufflinks 3.276        
cufflinks 26.624       High
cufflinks 3.404        
cufflinks 8.546        

0 Strain