Gene : AT2G37230 A. thaliana TAIR10
Defline:  (1 of 24) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3083
Name:  ? AT2G37230 Secondary Identifier:  ? PAC:19638163
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G37230 0.5kb upstream 0.5kb upstream 2977 true Chr2: 15637046-15640022 Arabidopsis thaliana
AT2G37230 0.5kb upstream 0.5kb upstream 500 false Chr2: 15639523-15640022 Arabidopsis thaliana
AT2G37230 0.5kb downstream 0.5kb downstream 2977 true Chr2: 15636546-15639522 Arabidopsis thaliana
AT2G37230 0.5kb downstream 0.5kb downstream 500 false Chr2: 15636546-15637045 Arabidopsis thaliana
AT2G37230 1.0kb upstream 1.0kb upstream 3477 true Chr2: 15637046-15640522 Arabidopsis thaliana
AT2G37230 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15639523-15640522 Arabidopsis thaliana
AT2G37230 1.0kb downstream 1.0kb downstream 3477 true Chr2: 15636046-15639522 Arabidopsis thaliana
AT2G37230 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15636046-15637045 Arabidopsis thaliana
AT2G37230 2.0kb upstream 2.0kb upstream 4477 true Chr2: 15637046-15641522 Arabidopsis thaliana
AT2G37230 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15639523-15641522 Arabidopsis thaliana
AT2G37230 2.0kb downstream 2.0kb downstream 4477 true Chr2: 15635046-15639522 Arabidopsis thaliana
AT2G37230 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15635046-15637045 Arabidopsis thaliana
AT2G37230 5.0kb upstream 5.0kb upstream 7477 true Chr2: 15637046-15644522 Arabidopsis thaliana
AT2G37230 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15639523-15644522 Arabidopsis thaliana
AT2G37230 5.0kb downstream 5.0kb downstream 7477 true Chr2: 15632046-15639522 Arabidopsis thaliana
AT2G37230 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15632046-15637045 Arabidopsis thaliana
AT2G37230 10.0kb upstream 10.0kb upstream 12477 true Chr2: 15637046-15649522 Arabidopsis thaliana
AT2G37230 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15639523-15649522 Arabidopsis thaliana
AT2G37230 10.0kb downstream 10.0kb downstream 12477 true Chr2: 15627046-15639522 Arabidopsis thaliana
AT2G37230 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15627046-15637045 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366334 5261 Brassicaceae View MSA
123829407 5264 Brassicales-Malvales View MSA
124336947 5266 SBM View MSA
124237102 5268 Malvidae View MSA
124067388 5270 Rosid View MSA
123740629 5271 Pentapetalae View MSA
122786381 5272 Eudicot View MSA
122046453 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310608 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.365        
cufflinks 17.25        
cufflinks 9.811        
cufflinks 17.292        
cufflinks 7.943       Low
cufflinks 20.498       High

0 Strain