Gene : AT2G36300 A. thaliana TAIR10
Defline:  (1 of 2) PTHR21236//PTHR21236:SF8 - GOLGI MEMBRANE PROTEIN YIP1 // INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Genomic Order:  2976
Name:  ? AT2G36300 Secondary Identifier:  ? PAC:19642456
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G36300 0.5kb upstream 0.5kb upstream 1751 true Chr2: 15213022-15214772 Arabidopsis thaliana
AT2G36300 0.5kb upstream 0.5kb upstream 500 false Chr2: 15214273-15214772 Arabidopsis thaliana
AT2G36300 0.5kb downstream 0.5kb downstream 1751 true Chr2: 15212522-15214272 Arabidopsis thaliana
AT2G36300 0.5kb downstream 0.5kb downstream 500 false Chr2: 15212522-15213021 Arabidopsis thaliana
AT2G36300 1.0kb upstream 1.0kb upstream 2251 true Chr2: 15213022-15215272 Arabidopsis thaliana
AT2G36300 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15214273-15215272 Arabidopsis thaliana
AT2G36300 1.0kb downstream 1.0kb downstream 2251 true Chr2: 15212022-15214272 Arabidopsis thaliana
AT2G36300 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15212022-15213021 Arabidopsis thaliana
AT2G36300 2.0kb upstream 2.0kb upstream 3251 true Chr2: 15213022-15216272 Arabidopsis thaliana
AT2G36300 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15214273-15216272 Arabidopsis thaliana
AT2G36300 2.0kb downstream 2.0kb downstream 3251 true Chr2: 15211022-15214272 Arabidopsis thaliana
AT2G36300 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15211022-15213021 Arabidopsis thaliana
AT2G36300 5.0kb upstream 5.0kb upstream 6251 true Chr2: 15213022-15219272 Arabidopsis thaliana
AT2G36300 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15214273-15219272 Arabidopsis thaliana
AT2G36300 5.0kb downstream 5.0kb downstream 6251 true Chr2: 15208022-15214272 Arabidopsis thaliana
AT2G36300 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15208022-15213021 Arabidopsis thaliana
AT2G36300 10.0kb upstream 10.0kb upstream 11251 true Chr2: 15213022-15224272 Arabidopsis thaliana
AT2G36300 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15214273-15224272 Arabidopsis thaliana
AT2G36300 10.0kb downstream 10.0kb downstream 11251 true Chr2: 15203022-15214272 Arabidopsis thaliana
AT2G36300 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15203022-15213021 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372175 5261 Brassicaceae View MSA
123841173 5264 Brassicales-Malvales View MSA
124339773 5266 SBM View MSA
124237053 5268 Malvidae View MSA
124071783 5270 Rosid View MSA
123751482 5271 Pentapetalae View MSA
122787116 5272 Eudicot View MSA
122046635 5273 Angiosperm View MSA
121346620 5274 Embryophyte View MSA
123427417 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.784        
cufflinks 16.935        
cufflinks 9.06       Low
cufflinks 18.519        
cufflinks 11.524        
cufflinks 22.879       High

0 Strain