Gene : AT2G36170 A. thaliana TAIR10
Defline:  (1 of 2) K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Genomic Order:  2961
Name:  ? AT2G36170 Secondary Identifier:  ? PAC:19643086
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G36170 0.5kb upstream 0.5kb upstream 1687 true Chr2: 15171594-15173280 Arabidopsis thaliana
AT2G36170 0.5kb upstream 0.5kb upstream 500 false Chr2: 15171594-15172093 Arabidopsis thaliana
AT2G36170 0.5kb downstream 0.5kb downstream 1687 true Chr2: 15172094-15173780 Arabidopsis thaliana
AT2G36170 0.5kb downstream 0.5kb downstream 500 false Chr2: 15173281-15173780 Arabidopsis thaliana
AT2G36170 1.0kb upstream 1.0kb upstream 2187 true Chr2: 15171094-15173280 Arabidopsis thaliana
AT2G36170 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15171094-15172093 Arabidopsis thaliana
AT2G36170 1.0kb downstream 1.0kb downstream 2187 true Chr2: 15172094-15174280 Arabidopsis thaliana
AT2G36170 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15173281-15174280 Arabidopsis thaliana
AT2G36170 2.0kb upstream 2.0kb upstream 3187 true Chr2: 15170094-15173280 Arabidopsis thaliana
AT2G36170 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15170094-15172093 Arabidopsis thaliana
AT2G36170 2.0kb downstream 2.0kb downstream 3187 true Chr2: 15172094-15175280 Arabidopsis thaliana
AT2G36170 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15173281-15175280 Arabidopsis thaliana
AT2G36170 5.0kb upstream 5.0kb upstream 6187 true Chr2: 15167094-15173280 Arabidopsis thaliana
AT2G36170 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15167094-15172093 Arabidopsis thaliana
AT2G36170 5.0kb downstream 5.0kb downstream 6187 true Chr2: 15172094-15178280 Arabidopsis thaliana
AT2G36170 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15173281-15178280 Arabidopsis thaliana
AT2G36170 10.0kb upstream 10.0kb upstream 11187 true Chr2: 15162094-15173280 Arabidopsis thaliana
AT2G36170 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15162094-15172093 Arabidopsis thaliana
AT2G36170 10.0kb downstream 10.0kb downstream 11187 true Chr2: 15172094-15183280 Arabidopsis thaliana
AT2G36170 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15173281-15183280 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379715 5261 Brassicaceae View MSA
123841008 5264 Brassicales-Malvales View MSA
124341254 5266 SBM View MSA
124250872 5268 Malvidae View MSA
124071470 5270 Rosid View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.145     High  
cufflinks 111.553     High  
cufflinks 63.147     High  
cufflinks 105.19     High  
cufflinks 50.219     High Low
cufflinks 121.517     High High

0 Strain