Gene : AT2G33840 A. thaliana TAIR10
Defline:  (1 of 3) 6.1.1.1 - Tyrosine--tRNA ligase / Tyrosyl-tRNA synthetase Genomic Order:  2717
Name:  ? AT2G33840 Secondary Identifier:  ? PAC:19642966
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G33840 0.5kb upstream 0.5kb upstream 3056 true Chr2: 14314444-14317499 Arabidopsis thaliana
AT2G33840 0.5kb upstream 0.5kb upstream 500 false Chr2: 14314444-14314943 Arabidopsis thaliana
AT2G33840 0.5kb downstream 0.5kb downstream 3056 true Chr2: 14314944-14317999 Arabidopsis thaliana
AT2G33840 0.5kb downstream 0.5kb downstream 500 false Chr2: 14317500-14317999 Arabidopsis thaliana
AT2G33840 1.0kb upstream 1.0kb upstream 3556 true Chr2: 14313944-14317499 Arabidopsis thaliana
AT2G33840 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14313944-14314943 Arabidopsis thaliana
AT2G33840 1.0kb downstream 1.0kb downstream 3556 true Chr2: 14314944-14318499 Arabidopsis thaliana
AT2G33840 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14317500-14318499 Arabidopsis thaliana
AT2G33840 2.0kb upstream 2.0kb upstream 4556 true Chr2: 14312944-14317499 Arabidopsis thaliana
AT2G33840 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14312944-14314943 Arabidopsis thaliana
AT2G33840 2.0kb downstream 2.0kb downstream 4556 true Chr2: 14314944-14319499 Arabidopsis thaliana
AT2G33840 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14317500-14319499 Arabidopsis thaliana
AT2G33840 5.0kb upstream 5.0kb upstream 7556 true Chr2: 14309944-14317499 Arabidopsis thaliana
AT2G33840 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14309944-14314943 Arabidopsis thaliana
AT2G33840 5.0kb downstream 5.0kb downstream 7556 true Chr2: 14314944-14322499 Arabidopsis thaliana
AT2G33840 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14317500-14322499 Arabidopsis thaliana
AT2G33840 10.0kb upstream 10.0kb upstream 12556 true Chr2: 14304944-14317499 Arabidopsis thaliana
AT2G33840 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14304944-14314943 Arabidopsis thaliana
AT2G33840 10.0kb downstream 10.0kb downstream 12556 true Chr2: 14314944-14327499 Arabidopsis thaliana
AT2G33840 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14317500-14327499 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
122377924 5261 Brassicaceae View MSA
123834214 5264 Brassicales-Malvales View MSA
124340654 5266 SBM View MSA
124239628 5268 Malvidae View MSA
124067853 5270 Rosid View MSA
123747436 5271 Pentapetalae View MSA
122790144 5272 Eudicot View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.282        
cufflinks 17.058        
cufflinks 9.398        
cufflinks 18.981        
cufflinks 9.371        
cufflinks 19.243       High

0 Strain