Gene : PTAC18 A. thaliana TAIR10
Primary Identifier:  ? AT2G32180 Defline:  (1 of 3) PTHR33271//PTHR33271:SF7 - FAMILY NOT NAMED // PLASTID TRANSCRIPTIONALLY ACTIVE 18
Genomic Order:  2530 Name:  ? AT2G32180
Secondary Identifier:  ? PAC:19639608
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G32180 0.5kb upstream 0.5kb upstream 1507 true Chr2: 13672250-13673756 Arabidopsis thaliana
AT2G32180 0.5kb upstream 0.5kb upstream 500 false Chr2: 13673257-13673756 Arabidopsis thaliana
AT2G32180 0.5kb downstream 0.5kb downstream 1507 true Chr2: 13671750-13673256 Arabidopsis thaliana
AT2G32180 0.5kb downstream 0.5kb downstream 500 false Chr2: 13671750-13672249 Arabidopsis thaliana
AT2G32180 1.0kb upstream 1.0kb upstream 2007 true Chr2: 13672250-13674256 Arabidopsis thaliana
AT2G32180 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13673257-13674256 Arabidopsis thaliana
AT2G32180 1.0kb downstream 1.0kb downstream 2007 true Chr2: 13671250-13673256 Arabidopsis thaliana
AT2G32180 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13671250-13672249 Arabidopsis thaliana
AT2G32180 2.0kb upstream 2.0kb upstream 3007 true Chr2: 13672250-13675256 Arabidopsis thaliana
AT2G32180 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13673257-13675256 Arabidopsis thaliana
AT2G32180 2.0kb downstream 2.0kb downstream 3007 true Chr2: 13670250-13673256 Arabidopsis thaliana
AT2G32180 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13670250-13672249 Arabidopsis thaliana
AT2G32180 5.0kb upstream 5.0kb upstream 6007 true Chr2: 13672250-13678256 Arabidopsis thaliana
AT2G32180 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13673257-13678256 Arabidopsis thaliana
AT2G32180 5.0kb downstream 5.0kb downstream 6007 true Chr2: 13667250-13673256 Arabidopsis thaliana
AT2G32180 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13667250-13672249 Arabidopsis thaliana
AT2G32180 10.0kb upstream 10.0kb upstream 11007 true Chr2: 13672250-13683256 Arabidopsis thaliana
AT2G32180 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13673257-13683256 Arabidopsis thaliana
AT2G32180 10.0kb downstream 10.0kb downstream 11007 true Chr2: 13662250-13673256 Arabidopsis thaliana
AT2G32180 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13662250-13672249 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365655 5261 Brassicaceae View MSA
123832756 5264 Brassicales-Malvales View MSA
124346131 5266 SBM View MSA
124237058 5268 Malvidae View MSA
124065223 5270 Rosid View MSA
123741295 5271 Pentapetalae View MSA
122787769 5272 Eudicot View MSA
122043400 5273 Angiosperm View MSA
121346471 5274 Embryophyte View MSA
123380389 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.688        
cufflinks 1.776        
cufflinks 28.745     High High
cufflinks 1.549        
cufflinks 20.513        
cufflinks 1.654        

0 Strain