Gene : CYS2 A. thaliana TAIR10
Primary Identifier:  ? AT2G31980 Defline:  (1 of 1) PTHR11413:SF38 - CYSTEINE PROTEINASE INHIBITOR 2
Genomic Order:  2509 Name:  ? AT2G31980
Secondary Identifier:  ? PAC:19638323
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G31980 0.5kb upstream 0.5kb upstream 1310 true Chr2: 13609093-13610402 Arabidopsis thaliana
AT2G31980 0.5kb upstream 0.5kb upstream 500 false Chr2: 13609903-13610402 Arabidopsis thaliana
AT2G31980 0.5kb downstream 0.5kb downstream 1310 true Chr2: 13608593-13609902 Arabidopsis thaliana
AT2G31980 0.5kb downstream 0.5kb downstream 500 false Chr2: 13608593-13609092 Arabidopsis thaliana
AT2G31980 1.0kb upstream 1.0kb upstream 1810 true Chr2: 13609093-13610902 Arabidopsis thaliana
AT2G31980 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13609903-13610902 Arabidopsis thaliana
AT2G31980 1.0kb downstream 1.0kb downstream 1810 true Chr2: 13608093-13609902 Arabidopsis thaliana
AT2G31980 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13608093-13609092 Arabidopsis thaliana
AT2G31980 2.0kb upstream 2.0kb upstream 2810 true Chr2: 13609093-13611902 Arabidopsis thaliana
AT2G31980 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13609903-13611902 Arabidopsis thaliana
AT2G31980 2.0kb downstream 2.0kb downstream 2810 true Chr2: 13607093-13609902 Arabidopsis thaliana
AT2G31980 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13607093-13609092 Arabidopsis thaliana
AT2G31980 5.0kb upstream 5.0kb upstream 5810 true Chr2: 13609093-13614902 Arabidopsis thaliana
AT2G31980 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13609903-13614902 Arabidopsis thaliana
AT2G31980 5.0kb downstream 5.0kb downstream 5810 true Chr2: 13604093-13609902 Arabidopsis thaliana
AT2G31980 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13604093-13609092 Arabidopsis thaliana
AT2G31980 10.0kb upstream 10.0kb upstream 10810 true Chr2: 13609093-13619902 Arabidopsis thaliana
AT2G31980 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13609903-13619902 Arabidopsis thaliana
AT2G31980 10.0kb downstream 10.0kb downstream 10810 true Chr2: 13599093-13609902 Arabidopsis thaliana
AT2G31980 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13599093-13609092 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361838 5261 Brassicaceae View MSA
123831582 5264 Brassicales-Malvales View MSA
124337525 5266 SBM View MSA
124251566 5268 Malvidae View MSA
124069971 5270 Rosid View MSA
123746395 5271 Pentapetalae View MSA
122797180 5272 Eudicot View MSA
122051666 5273 Angiosperm View MSA
121351690 5274 Embryophyte View MSA
123426487 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.499        
cufflinks 1.272        
cufflinks 4.796       High
cufflinks 1.416        
cufflinks 2.235        
cufflinks 2.374        

0 Strain