Gene : AT2G30660 A. thaliana TAIR10
Defline:  (1 of 3) PTHR11941//PTHR11941:SF81 - ENOYL-COA HYDRATASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2358
Name:  ? AT2G30660 Secondary Identifier:  ? PAC:19639659
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7574 Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30660 0.5kb upstream 0.5kb upstream 3924 true Chr2: 13058250-13062173 Arabidopsis thaliana
AT2G30660 0.5kb upstream 0.5kb upstream 500 false Chr2: 13061674-13062173 Arabidopsis thaliana
AT2G30660 0.5kb downstream 0.5kb downstream 3924 true Chr2: 13057750-13061673 Arabidopsis thaliana
AT2G30660 0.5kb downstream 0.5kb downstream 500 false Chr2: 13057750-13058249 Arabidopsis thaliana
AT2G30660 1.0kb upstream 1.0kb upstream 4424 true Chr2: 13058250-13062673 Arabidopsis thaliana
AT2G30660 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13061674-13062673 Arabidopsis thaliana
AT2G30660 1.0kb downstream 1.0kb downstream 4424 true Chr2: 13057250-13061673 Arabidopsis thaliana
AT2G30660 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13057250-13058249 Arabidopsis thaliana
AT2G30660 2.0kb upstream 2.0kb upstream 5424 true Chr2: 13058250-13063673 Arabidopsis thaliana
AT2G30660 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13061674-13063673 Arabidopsis thaliana
AT2G30660 2.0kb downstream 2.0kb downstream 5424 true Chr2: 13056250-13061673 Arabidopsis thaliana
AT2G30660 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13056250-13058249 Arabidopsis thaliana
AT2G30660 5.0kb upstream 5.0kb upstream 8424 true Chr2: 13058250-13066673 Arabidopsis thaliana
AT2G30660 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13061674-13066673 Arabidopsis thaliana
AT2G30660 5.0kb downstream 5.0kb downstream 8424 true Chr2: 13053250-13061673 Arabidopsis thaliana
AT2G30660 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13053250-13058249 Arabidopsis thaliana
AT2G30660 10.0kb upstream 10.0kb upstream 13424 true Chr2: 13058250-13071673 Arabidopsis thaliana
AT2G30660 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13061674-13071673 Arabidopsis thaliana
AT2G30660 10.0kb downstream 10.0kb downstream 13424 true Chr2: 13048250-13061673 Arabidopsis thaliana
AT2G30660 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13048250-13058249 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381245 5261 Brassicaceae View MSA
123838723 5264 Brassicales-Malvales View MSA
124343848 5266 SBM View MSA
124242681 5268 Malvidae View MSA
124073878 5270 Rosid View MSA
123743362 5271 Pentapetalae View MSA
122792177 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.265     Low High
cufflinks 0.004     Low Low
cufflinks 0.039     Low  
cufflinks 0.041     Low  
cufflinks 0.086     Low  
cufflinks 0.018     Low  

0 Strain