Gene : AT2G30380 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31161:SF9 - MYB FAMILY TRANSCRIPTION FACTOR-RELATED Genomic Order:  2328
Name:  ? AT2G30380 Secondary Identifier:  ? PAC:19639524
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30380 0.5kb upstream 0.5kb upstream 2790 true Chr2: 12947784-12950573 Arabidopsis thaliana
AT2G30380 0.5kb upstream 0.5kb upstream 500 false Chr2: 12947784-12948283 Arabidopsis thaliana
AT2G30380 0.5kb downstream 0.5kb downstream 2790 true Chr2: 12948284-12951073 Arabidopsis thaliana
AT2G30380 0.5kb downstream 0.5kb downstream 500 false Chr2: 12950574-12951073 Arabidopsis thaliana
AT2G30380 1.0kb upstream 1.0kb upstream 3290 true Chr2: 12947284-12950573 Arabidopsis thaliana
AT2G30380 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12947284-12948283 Arabidopsis thaliana
AT2G30380 1.0kb downstream 1.0kb downstream 3290 true Chr2: 12948284-12951573 Arabidopsis thaliana
AT2G30380 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12950574-12951573 Arabidopsis thaliana
AT2G30380 2.0kb upstream 2.0kb upstream 4290 true Chr2: 12946284-12950573 Arabidopsis thaliana
AT2G30380 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12946284-12948283 Arabidopsis thaliana
AT2G30380 2.0kb downstream 2.0kb downstream 4290 true Chr2: 12948284-12952573 Arabidopsis thaliana
AT2G30380 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12950574-12952573 Arabidopsis thaliana
AT2G30380 5.0kb upstream 5.0kb upstream 7290 true Chr2: 12943284-12950573 Arabidopsis thaliana
AT2G30380 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12943284-12948283 Arabidopsis thaliana
AT2G30380 5.0kb downstream 5.0kb downstream 7290 true Chr2: 12948284-12955573 Arabidopsis thaliana
AT2G30380 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12950574-12955573 Arabidopsis thaliana
AT2G30380 10.0kb upstream 10.0kb upstream 12290 true Chr2: 12938284-12950573 Arabidopsis thaliana
AT2G30380 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12938284-12948283 Arabidopsis thaliana
AT2G30380 10.0kb downstream 10.0kb downstream 12290 true Chr2: 12948284-12960573 Arabidopsis thaliana
AT2G30380 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12950574-12960573 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
122329240 5261 Brassicaceae Singleton cluster - no MSA
123770554 5264 Brassicales-Malvales Singleton cluster - no MSA
124269092 5266 SBM Singleton cluster - no MSA
124125254 5268 Malvidae Singleton cluster - no MSA
124064348 5270 Rosid View MSA
123740612 5271 Pentapetalae View MSA
122790219 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.081     Low  
cufflinks 0.439        
cufflinks 0.036     Low  
cufflinks 0.441        
cufflinks 0.021     Low Low
cufflinks 0.747       High

0 Strain