Gene : AT2G30330 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13073:SF0 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 1 Genomic Order:  2323
Name:  ? AT2G30330 Secondary Identifier:  ? PAC:19641446
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30330 0.5kb upstream 0.5kb upstream 1471 true Chr2: 12928767-12930237 Arabidopsis thaliana
AT2G30330 0.5kb upstream 0.5kb upstream 500 false Chr2: 12929738-12930237 Arabidopsis thaliana
AT2G30330 0.5kb downstream 0.5kb downstream 1471 true Chr2: 12928267-12929737 Arabidopsis thaliana
AT2G30330 0.5kb downstream 0.5kb downstream 500 false Chr2: 12928267-12928766 Arabidopsis thaliana
AT2G30330 1.0kb upstream 1.0kb upstream 1971 true Chr2: 12928767-12930737 Arabidopsis thaliana
AT2G30330 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12929738-12930737 Arabidopsis thaliana
AT2G30330 1.0kb downstream 1.0kb downstream 1971 true Chr2: 12927767-12929737 Arabidopsis thaliana
AT2G30330 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12927767-12928766 Arabidopsis thaliana
AT2G30330 2.0kb upstream 2.0kb upstream 2971 true Chr2: 12928767-12931737 Arabidopsis thaliana
AT2G30330 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12929738-12931737 Arabidopsis thaliana
AT2G30330 2.0kb downstream 2.0kb downstream 2971 true Chr2: 12926767-12929737 Arabidopsis thaliana
AT2G30330 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12926767-12928766 Arabidopsis thaliana
AT2G30330 5.0kb upstream 5.0kb upstream 5971 true Chr2: 12928767-12934737 Arabidopsis thaliana
AT2G30330 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12929738-12934737 Arabidopsis thaliana
AT2G30330 5.0kb downstream 5.0kb downstream 5971 true Chr2: 12923767-12929737 Arabidopsis thaliana
AT2G30330 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12923767-12928766 Arabidopsis thaliana
AT2G30330 10.0kb upstream 10.0kb upstream 10971 true Chr2: 12928767-12939737 Arabidopsis thaliana
AT2G30330 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12929738-12939737 Arabidopsis thaliana
AT2G30330 10.0kb downstream 10.0kb downstream 10971 true Chr2: 12918767-12929737 Arabidopsis thaliana
AT2G30330 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12918767-12928766 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367392 5261 Brassicaceae View MSA
123830263 5264 Brassicales-Malvales View MSA
124340617 5266 SBM View MSA
124241347 5268 Malvidae View MSA
124067786 5270 Rosid View MSA
123736631 5271 Pentapetalae View MSA
122790924 5272 Eudicot View MSA
122042285 5273 Angiosperm View MSA
121346098 5274 Embryophyte View MSA
123425317 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.202        
cufflinks 9.178        
cufflinks 8.354        
cufflinks 8.662        
cufflinks 7.151       Low
cufflinks 9.403        

0 Strain