Gene : AT2G30120 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  2304
Name:  ? AT2G30120 Secondary Identifier:  ? PAC:19641733
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30120 0.5kb upstream 0.5kb upstream 1870 true Chr2: 12860541-12862410 Arabidopsis thaliana
AT2G30120 0.5kb upstream 0.5kb upstream 500 false Chr2: 12861911-12862410 Arabidopsis thaliana
AT2G30120 0.5kb downstream 0.5kb downstream 1870 true Chr2: 12860041-12861910 Arabidopsis thaliana
AT2G30120 0.5kb downstream 0.5kb downstream 500 false Chr2: 12860041-12860540 Arabidopsis thaliana
AT2G30120 1.0kb upstream 1.0kb upstream 2370 true Chr2: 12860541-12862910 Arabidopsis thaliana
AT2G30120 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12861911-12862910 Arabidopsis thaliana
AT2G30120 1.0kb downstream 1.0kb downstream 2370 true Chr2: 12859541-12861910 Arabidopsis thaliana
AT2G30120 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12859541-12860540 Arabidopsis thaliana
AT2G30120 2.0kb upstream 2.0kb upstream 3370 true Chr2: 12860541-12863910 Arabidopsis thaliana
AT2G30120 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12861911-12863910 Arabidopsis thaliana
AT2G30120 2.0kb downstream 2.0kb downstream 3370 true Chr2: 12858541-12861910 Arabidopsis thaliana
AT2G30120 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12858541-12860540 Arabidopsis thaliana
AT2G30120 5.0kb upstream 5.0kb upstream 6370 true Chr2: 12860541-12866910 Arabidopsis thaliana
AT2G30120 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12861911-12866910 Arabidopsis thaliana
AT2G30120 5.0kb downstream 5.0kb downstream 6370 true Chr2: 12855541-12861910 Arabidopsis thaliana
AT2G30120 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12855541-12860540 Arabidopsis thaliana
AT2G30120 10.0kb upstream 10.0kb upstream 11370 true Chr2: 12860541-12871910 Arabidopsis thaliana
AT2G30120 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12861911-12871910 Arabidopsis thaliana
AT2G30120 10.0kb downstream 10.0kb downstream 11370 true Chr2: 12850541-12861910 Arabidopsis thaliana
AT2G30120 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12850541-12860540 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
122375583 5261 Brassicaceae View MSA
123834343 5264 Brassicales-Malvales View MSA
124342935 5266 SBM View MSA
124239345 5268 Malvidae View MSA
124060836 5270 Rosid View MSA
123743028 5271 Pentapetalae View MSA
122794369 5272 Eudicot View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.669        
cufflinks 4.832        
cufflinks 2.381       Low
cufflinks 5.262        
cufflinks 2.613       Low
cufflinks 4.965        

0 Strain