Gene : AT2G30730 A. thaliana TAIR10
Defline:  (1 of 5) PTHR27001:SF115 - PTI1-LIKE TYROSINE-PROTEIN KINASE 1-RELATED Genomic Order:  2366
Name:  ? AT2G30730 Secondary Identifier:  ? PAC:19638426
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G30730 0.5kb upstream 0.5kb upstream 2033 true Chr2: 13092645-13094677 Arabidopsis thaliana
AT2G30730 0.5kb upstream 0.5kb upstream 500 false Chr2: 13092645-13093144 Arabidopsis thaliana
AT2G30730 0.5kb downstream 0.5kb downstream 2033 true Chr2: 13093145-13095177 Arabidopsis thaliana
AT2G30730 0.5kb downstream 0.5kb downstream 500 false Chr2: 13094678-13095177 Arabidopsis thaliana
AT2G30730 1.0kb upstream 1.0kb upstream 2533 true Chr2: 13092145-13094677 Arabidopsis thaliana
AT2G30730 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13092145-13093144 Arabidopsis thaliana
AT2G30730 1.0kb downstream 1.0kb downstream 2533 true Chr2: 13093145-13095677 Arabidopsis thaliana
AT2G30730 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13094678-13095677 Arabidopsis thaliana
AT2G30730 2.0kb upstream 2.0kb upstream 3533 true Chr2: 13091145-13094677 Arabidopsis thaliana
AT2G30730 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13091145-13093144 Arabidopsis thaliana
AT2G30730 2.0kb downstream 2.0kb downstream 3533 true Chr2: 13093145-13096677 Arabidopsis thaliana
AT2G30730 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13094678-13096677 Arabidopsis thaliana
AT2G30730 5.0kb upstream 5.0kb upstream 6533 true Chr2: 13088145-13094677 Arabidopsis thaliana
AT2G30730 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13088145-13093144 Arabidopsis thaliana
AT2G30730 5.0kb downstream 5.0kb downstream 6533 true Chr2: 13093145-13099677 Arabidopsis thaliana
AT2G30730 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13094678-13099677 Arabidopsis thaliana
AT2G30730 10.0kb upstream 10.0kb upstream 11533 true Chr2: 13083145-13094677 Arabidopsis thaliana
AT2G30730 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13083145-13093144 Arabidopsis thaliana
AT2G30730 10.0kb downstream 10.0kb downstream 11533 true Chr2: 13093145-13104677 Arabidopsis thaliana
AT2G30730 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13094678-13104677 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329119 5261 Brassicaceae Singleton cluster - no MSA
123770434 5264 Brassicales-Malvales Singleton cluster - no MSA
124268974 5266 SBM Singleton cluster - no MSA
124255189 5268 Malvidae View MSA
124075862 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083     Low Low
cufflinks 0.285     Low  
cufflinks 0.106     Low  
cufflinks 0.343     Low High
cufflinks 0.12     Low  
cufflinks 0.262     Low  

0 Strain