Gene : FUC1 A. thaliana TAIR10
Primary Identifier:  ? AT2G28100 Defline:  (1 of 1) PTHR10030//PTHR10030:SF27 - ALPHA-L-FUCOSIDASE // ALPHA-L-FUCOSIDASE 1
Genomic Order:  2094 Name:  ? AT2G28100
Secondary Identifier:  ? PAC:19642363
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G28100 0.5kb upstream 0.5kb upstream 2438 true Chr2: 11974163-11976600 Arabidopsis thaliana
AT2G28100 0.5kb upstream 0.5kb upstream 500 false Chr2: 11974163-11974662 Arabidopsis thaliana
AT2G28100 0.5kb downstream 0.5kb downstream 2438 true Chr2: 11974663-11977100 Arabidopsis thaliana
AT2G28100 0.5kb downstream 0.5kb downstream 500 false Chr2: 11976601-11977100 Arabidopsis thaliana
AT2G28100 1.0kb upstream 1.0kb upstream 2938 true Chr2: 11973663-11976600 Arabidopsis thaliana
AT2G28100 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11973663-11974662 Arabidopsis thaliana
AT2G28100 1.0kb downstream 1.0kb downstream 2938 true Chr2: 11974663-11977600 Arabidopsis thaliana
AT2G28100 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11976601-11977600 Arabidopsis thaliana
AT2G28100 2.0kb upstream 2.0kb upstream 3938 true Chr2: 11972663-11976600 Arabidopsis thaliana
AT2G28100 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11972663-11974662 Arabidopsis thaliana
AT2G28100 2.0kb downstream 2.0kb downstream 3938 true Chr2: 11974663-11978600 Arabidopsis thaliana
AT2G28100 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11976601-11978600 Arabidopsis thaliana
AT2G28100 5.0kb upstream 5.0kb upstream 6938 true Chr2: 11969663-11976600 Arabidopsis thaliana
AT2G28100 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11969663-11974662 Arabidopsis thaliana
AT2G28100 5.0kb downstream 5.0kb downstream 6938 true Chr2: 11974663-11981600 Arabidopsis thaliana
AT2G28100 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11976601-11981600 Arabidopsis thaliana
AT2G28100 10.0kb upstream 10.0kb upstream 11938 true Chr2: 11964663-11976600 Arabidopsis thaliana
AT2G28100 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11964663-11974662 Arabidopsis thaliana
AT2G28100 10.0kb downstream 10.0kb downstream 11938 true Chr2: 11974663-11986600 Arabidopsis thaliana
AT2G28100 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11976601-11986600 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373680 5261 Brassicaceae View MSA
123830686 5264 Brassicales-Malvales View MSA
124345871 5266 SBM View MSA
124242113 5268 Malvidae View MSA
124066519 5270 Rosid View MSA
123739256 5271 Pentapetalae View MSA
122786105 5272 Eudicot View MSA
122047264 5273 Angiosperm View MSA
121351387 5274 Embryophyte View MSA
123382147 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.09       Low
cufflinks 16.229       High
cufflinks 13.515        
cufflinks 13.587        
cufflinks 10.414       Low
cufflinks 13.405        

0 Strain