Gene : AT2G27770 A. thaliana TAIR10
Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  2063
Name:  ? AT2G27770 Secondary Identifier:  ? PAC:19641705
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27770 0.5kb upstream 0.5kb upstream 2061 true Chr2: 11832809-11834869 Arabidopsis thaliana
AT2G27770 0.5kb upstream 0.5kb upstream 500 false Chr2: 11834370-11834869 Arabidopsis thaliana
AT2G27770 0.5kb downstream 0.5kb downstream 2061 true Chr2: 11832309-11834369 Arabidopsis thaliana
AT2G27770 0.5kb downstream 0.5kb downstream 500 false Chr2: 11832309-11832808 Arabidopsis thaliana
AT2G27770 1.0kb upstream 1.0kb upstream 2561 true Chr2: 11832809-11835369 Arabidopsis thaliana
AT2G27770 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11834370-11835369 Arabidopsis thaliana
AT2G27770 1.0kb downstream 1.0kb downstream 2561 true Chr2: 11831809-11834369 Arabidopsis thaliana
AT2G27770 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11831809-11832808 Arabidopsis thaliana
AT2G27770 2.0kb upstream 2.0kb upstream 3561 true Chr2: 11832809-11836369 Arabidopsis thaliana
AT2G27770 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11834370-11836369 Arabidopsis thaliana
AT2G27770 2.0kb downstream 2.0kb downstream 3561 true Chr2: 11830809-11834369 Arabidopsis thaliana
AT2G27770 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11830809-11832808 Arabidopsis thaliana
AT2G27770 5.0kb upstream 5.0kb upstream 6561 true Chr2: 11832809-11839369 Arabidopsis thaliana
AT2G27770 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11834370-11839369 Arabidopsis thaliana
AT2G27770 5.0kb downstream 5.0kb downstream 6561 true Chr2: 11827809-11834369 Arabidopsis thaliana
AT2G27770 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11827809-11832808 Arabidopsis thaliana
AT2G27770 10.0kb upstream 10.0kb upstream 11561 true Chr2: 11832809-11844369 Arabidopsis thaliana
AT2G27770 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11834370-11844369 Arabidopsis thaliana
AT2G27770 10.0kb downstream 10.0kb downstream 11561 true Chr2: 11822809-11834369 Arabidopsis thaliana
AT2G27770 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11822809-11832808 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373704 5261 Brassicaceae View MSA
123831368 5264 Brassicales-Malvales View MSA
124338069 5266 SBM View MSA
124239203 5268 Malvidae View MSA
124061671 5270 Rosid View MSA
123746033 5271 Pentapetalae View MSA
122790628 5272 Eudicot View MSA
122050647 5273 Angiosperm View MSA
121312046 5274 Embryophyte View MSA
123349257 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.398       High
cufflinks 2.479       Low
cufflinks 4.242        
cufflinks 4.038        
cufflinks 4.282        
cufflinks 3.213        

0 Strain