Gene : AT2G27720 A. thaliana TAIR10
Defline:  (1 of 5) K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Genomic Order:  2058
Name:  ? AT2G27720 Secondary Identifier:  ? PAC:19639693
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27720 0.5kb upstream 0.5kb upstream 1588 true Chr2: 11817991-11819578 Arabidopsis thaliana
AT2G27720 0.5kb upstream 0.5kb upstream 500 false Chr2: 11817991-11818490 Arabidopsis thaliana
AT2G27720 0.5kb downstream 0.5kb downstream 1588 true Chr2: 11818491-11820078 Arabidopsis thaliana
AT2G27720 0.5kb downstream 0.5kb downstream 500 false Chr2: 11819579-11820078 Arabidopsis thaliana
AT2G27720 1.0kb upstream 1.0kb upstream 2088 true Chr2: 11817491-11819578 Arabidopsis thaliana
AT2G27720 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11817491-11818490 Arabidopsis thaliana
AT2G27720 1.0kb downstream 1.0kb downstream 2088 true Chr2: 11818491-11820578 Arabidopsis thaliana
AT2G27720 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11819579-11820578 Arabidopsis thaliana
AT2G27720 2.0kb upstream 2.0kb upstream 3088 true Chr2: 11816491-11819578 Arabidopsis thaliana
AT2G27720 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11816491-11818490 Arabidopsis thaliana
AT2G27720 2.0kb downstream 2.0kb downstream 3088 true Chr2: 11818491-11821578 Arabidopsis thaliana
AT2G27720 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11819579-11821578 Arabidopsis thaliana
AT2G27720 5.0kb upstream 5.0kb upstream 6088 true Chr2: 11813491-11819578 Arabidopsis thaliana
AT2G27720 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11813491-11818490 Arabidopsis thaliana
AT2G27720 5.0kb downstream 5.0kb downstream 6088 true Chr2: 11818491-11824578 Arabidopsis thaliana
AT2G27720 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11819579-11824578 Arabidopsis thaliana
AT2G27720 10.0kb upstream 10.0kb upstream 11088 true Chr2: 11808491-11819578 Arabidopsis thaliana
AT2G27720 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11808491-11818490 Arabidopsis thaliana
AT2G27720 10.0kb downstream 10.0kb downstream 11088 true Chr2: 11818491-11829578 Arabidopsis thaliana
AT2G27720 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11819579-11829578 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041516 5273 Angiosperm View MSA
122329262 5261 Brassicaceae Singleton cluster - no MSA
123841870 5264 Brassicales-Malvales View MSA
124323086 5266 SBM View MSA
124255306 5268 Malvidae View MSA
124073066 5270 Rosid View MSA
123742141 5271 Pentapetalae View MSA
122795888 5272 Eudicot View MSA
123429183 5275 Viridiplantae View MSA
121351420 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.468     High  
cufflinks 93.615     High  
cufflinks 58.384     High  
cufflinks 83.137     High  
cufflinks 47.694     High Low
cufflinks 96.085     High High

0 Strain