Gene : AT2G27385 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33083//PTHR33083:SF5 - FAMILY NOT NAMED // POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  2025
Name:  ? AT2G27385 Secondary Identifier:  ? PAC:19642423
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27385 0.5kb upstream 0.5kb upstream 1932 true Chr2: 11716001-11717932 Arabidopsis thaliana
AT2G27385 0.5kb upstream 0.5kb upstream 500 false Chr2: 11717433-11717932 Arabidopsis thaliana
AT2G27385 0.5kb downstream 0.5kb downstream 1932 true Chr2: 11715501-11717432 Arabidopsis thaliana
AT2G27385 0.5kb downstream 0.5kb downstream 500 false Chr2: 11715501-11716000 Arabidopsis thaliana
AT2G27385 1.0kb upstream 1.0kb upstream 2432 true Chr2: 11716001-11718432 Arabidopsis thaliana
AT2G27385 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11717433-11718432 Arabidopsis thaliana
AT2G27385 1.0kb downstream 1.0kb downstream 2432 true Chr2: 11715001-11717432 Arabidopsis thaliana
AT2G27385 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11715001-11716000 Arabidopsis thaliana
AT2G27385 2.0kb upstream 2.0kb upstream 3432 true Chr2: 11716001-11719432 Arabidopsis thaliana
AT2G27385 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11717433-11719432 Arabidopsis thaliana
AT2G27385 2.0kb downstream 2.0kb downstream 3432 true Chr2: 11714001-11717432 Arabidopsis thaliana
AT2G27385 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11714001-11716000 Arabidopsis thaliana
AT2G27385 5.0kb upstream 5.0kb upstream 6432 true Chr2: 11716001-11722432 Arabidopsis thaliana
AT2G27385 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11717433-11722432 Arabidopsis thaliana
AT2G27385 5.0kb downstream 5.0kb downstream 6432 true Chr2: 11711001-11717432 Arabidopsis thaliana
AT2G27385 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11711001-11716000 Arabidopsis thaliana
AT2G27385 10.0kb upstream 10.0kb upstream 11432 true Chr2: 11716001-11727432 Arabidopsis thaliana
AT2G27385 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11717433-11727432 Arabidopsis thaliana
AT2G27385 10.0kb downstream 10.0kb downstream 11432 true Chr2: 11706001-11717432 Arabidopsis thaliana
AT2G27385 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11706001-11716000 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374060 5261 Brassicaceae View MSA
123836097 5264 Brassicales-Malvales View MSA
124346132 5266 SBM View MSA
124241466 5268 Malvidae View MSA
124060830 5270 Rosid View MSA
123740315 5271 Pentapetalae View MSA
122789916 5272 Eudicot View MSA
122047516 5273 Angiosperm View MSA
121310750 5274 Embryophyte View MSA
123348161 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.769        
cufflinks 0.049     Low  
cufflinks 31.718     High  
cufflinks 0.079     Low  
cufflinks 29.833     High  
cufflinks 0.029     Low Low

0 Strain