Gene : AT2G27390 A. thaliana TAIR10
Defline:  proline-rich family protein Genomic Order:  2027
Name:  ? AT2G27390 Secondary Identifier:  ? PAC:19643470
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27390 0.5kb upstream 0.5kb upstream 905 true Chr2: 11720484-11721388 Arabidopsis thaliana
AT2G27390 0.5kb upstream 0.5kb upstream 500 false Chr2: 11720889-11721388 Arabidopsis thaliana
AT2G27390 0.5kb downstream 0.5kb downstream 905 true Chr2: 11719984-11720888 Arabidopsis thaliana
AT2G27390 0.5kb downstream 0.5kb downstream 500 false Chr2: 11719984-11720483 Arabidopsis thaliana
AT2G27390 1.0kb upstream 1.0kb upstream 1405 true Chr2: 11720484-11721888 Arabidopsis thaliana
AT2G27390 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11720889-11721888 Arabidopsis thaliana
AT2G27390 1.0kb downstream 1.0kb downstream 1405 true Chr2: 11719484-11720888 Arabidopsis thaliana
AT2G27390 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11719484-11720483 Arabidopsis thaliana
AT2G27390 2.0kb upstream 2.0kb upstream 2405 true Chr2: 11720484-11722888 Arabidopsis thaliana
AT2G27390 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11720889-11722888 Arabidopsis thaliana
AT2G27390 2.0kb downstream 2.0kb downstream 2405 true Chr2: 11718484-11720888 Arabidopsis thaliana
AT2G27390 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11718484-11720483 Arabidopsis thaliana
AT2G27390 5.0kb upstream 5.0kb upstream 5405 true Chr2: 11720484-11725888 Arabidopsis thaliana
AT2G27390 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11720889-11725888 Arabidopsis thaliana
AT2G27390 5.0kb downstream 5.0kb downstream 5405 true Chr2: 11715484-11720888 Arabidopsis thaliana
AT2G27390 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11715484-11720483 Arabidopsis thaliana
AT2G27390 10.0kb upstream 10.0kb upstream 10405 true Chr2: 11720484-11730888 Arabidopsis thaliana
AT2G27390 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11720889-11730888 Arabidopsis thaliana
AT2G27390 10.0kb downstream 10.0kb downstream 10405 true Chr2: 11710484-11720888 Arabidopsis thaliana
AT2G27390 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11710484-11720483 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494084 5273 Angiosperm Singleton cluster - no MSA
122329640 5261 Brassicaceae Singleton cluster - no MSA
123770934 5264 Brassicales-Malvales Singleton cluster - no MSA
124269468 5266 SBM Singleton cluster - no MSA
124125606 5268 Malvidae Singleton cluster - no MSA
123854568 5270 Rosid Singleton cluster - no MSA
123440583 5271 Pentapetalae Singleton cluster - no MSA
122476168 5272 Eudicot Singleton cluster - no MSA
120767456 5274 Embryophyte Singleton cluster - no MSA
122809853 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.037     Low Low
cufflinks 0.185     Low  
cufflinks 0.041     Low Low
cufflinks 0.286     Low  
cufflinks 0.265        
cufflinks 0.118     Low  

0 Strain