Gene : AT2G27290 A. thaliana TAIR10
Defline:  (1 of 2) KOG4526 - Predicted membrane protein Genomic Order:  2014
Name:  ? AT2G27290 Secondary Identifier:  ? PAC:19641982
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27290 0.5kb upstream 0.5kb upstream 1898 true Chr2: 11678400-11680297 Arabidopsis thaliana
AT2G27290 0.5kb upstream 0.5kb upstream 500 false Chr2: 11679798-11680297 Arabidopsis thaliana
AT2G27290 0.5kb downstream 0.5kb downstream 1898 true Chr2: 11677900-11679797 Arabidopsis thaliana
AT2G27290 0.5kb downstream 0.5kb downstream 500 false Chr2: 11677900-11678399 Arabidopsis thaliana
AT2G27290 1.0kb upstream 1.0kb upstream 2398 true Chr2: 11678400-11680797 Arabidopsis thaliana
AT2G27290 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11679798-11680797 Arabidopsis thaliana
AT2G27290 1.0kb downstream 1.0kb downstream 2398 true Chr2: 11677400-11679797 Arabidopsis thaliana
AT2G27290 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11677400-11678399 Arabidopsis thaliana
AT2G27290 2.0kb upstream 2.0kb upstream 3398 true Chr2: 11678400-11681797 Arabidopsis thaliana
AT2G27290 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11679798-11681797 Arabidopsis thaliana
AT2G27290 2.0kb downstream 2.0kb downstream 3398 true Chr2: 11676400-11679797 Arabidopsis thaliana
AT2G27290 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11676400-11678399 Arabidopsis thaliana
AT2G27290 5.0kb upstream 5.0kb upstream 6398 true Chr2: 11678400-11684797 Arabidopsis thaliana
AT2G27290 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11679798-11684797 Arabidopsis thaliana
AT2G27290 5.0kb downstream 5.0kb downstream 6398 true Chr2: 11673400-11679797 Arabidopsis thaliana
AT2G27290 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11673400-11678399 Arabidopsis thaliana
AT2G27290 10.0kb upstream 10.0kb upstream 11398 true Chr2: 11678400-11689797 Arabidopsis thaliana
AT2G27290 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11679798-11689797 Arabidopsis thaliana
AT2G27290 10.0kb downstream 10.0kb downstream 11398 true Chr2: 11668400-11679797 Arabidopsis thaliana
AT2G27290 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11668400-11678399 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374677 5261 Brassicaceae View MSA
123828491 5264 Brassicales-Malvales View MSA
124339718 5266 SBM View MSA
124237713 5268 Malvidae View MSA
124066079 5270 Rosid View MSA
123739162 5271 Pentapetalae View MSA
122786877 5272 Eudicot View MSA
122046265 5273 Angiosperm View MSA
121346382 5274 Embryophyte View MSA
123424955 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.546     High  
cufflinks 4.739        
cufflinks 53.795     High  
cufflinks 4.468        
cufflinks 53.019     High  
cufflinks 3.538       Low

0 Strain