Gene : AGL41 A. thaliana TAIR10
Primary Identifier:  ? AT2G26880 Defline:  (1 of 2) PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED
Genomic Order:  1967 Name:  ? AT2G26880
Secondary Identifier:  ? PAC:19640869
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G26880 0.5kb upstream 0.5kb upstream 1694 true Chr2: 11459906-11461599 Arabidopsis thaliana
AT2G26880 0.5kb upstream 0.5kb upstream 500 false Chr2: 11461100-11461599 Arabidopsis thaliana
AT2G26880 0.5kb downstream 0.5kb downstream 1694 true Chr2: 11459406-11461099 Arabidopsis thaliana
AT2G26880 0.5kb downstream 0.5kb downstream 500 false Chr2: 11459406-11459905 Arabidopsis thaliana
AT2G26880 1.0kb upstream 1.0kb upstream 2194 true Chr2: 11459906-11462099 Arabidopsis thaliana
AT2G26880 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11461100-11462099 Arabidopsis thaliana
AT2G26880 1.0kb downstream 1.0kb downstream 2194 true Chr2: 11458906-11461099 Arabidopsis thaliana
AT2G26880 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11458906-11459905 Arabidopsis thaliana
AT2G26880 2.0kb upstream 2.0kb upstream 3194 true Chr2: 11459906-11463099 Arabidopsis thaliana
AT2G26880 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11461100-11463099 Arabidopsis thaliana
AT2G26880 2.0kb downstream 2.0kb downstream 3194 true Chr2: 11457906-11461099 Arabidopsis thaliana
AT2G26880 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11457906-11459905 Arabidopsis thaliana
AT2G26880 5.0kb upstream 5.0kb upstream 6194 true Chr2: 11459906-11466099 Arabidopsis thaliana
AT2G26880 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11461100-11466099 Arabidopsis thaliana
AT2G26880 5.0kb downstream 5.0kb downstream 6194 true Chr2: 11454906-11461099 Arabidopsis thaliana
AT2G26880 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11454906-11459905 Arabidopsis thaliana
AT2G26880 10.0kb upstream 10.0kb upstream 11194 true Chr2: 11459906-11471099 Arabidopsis thaliana
AT2G26880 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11461100-11471099 Arabidopsis thaliana
AT2G26880 10.0kb downstream 10.0kb downstream 11194 true Chr2: 11449906-11461099 Arabidopsis thaliana
AT2G26880 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11449906-11459905 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493897 5273 Angiosperm Singleton cluster - no MSA
122329383 5261 Brassicaceae Singleton cluster - no MSA
123770692 5264 Brassicales-Malvales Singleton cluster - no MSA
124269230 5266 SBM Singleton cluster - no MSA
124125382 5268 Malvidae Singleton cluster - no MSA
123854357 5270 Rosid Singleton cluster - no MSA
123440383 5271 Pentapetalae Singleton cluster - no MSA
122475972 5272 Eudicot Singleton cluster - no MSA
120767271 5274 Embryophyte Singleton cluster - no MSA
122809668 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain