Gene : AT2G26110 A. thaliana TAIR10
Defline:  (1 of 5) PF05553//PF14364 - Cotton fibre expressed protein (DUF761) // Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  1887
Name:  ? AT2G26110 Secondary Identifier:  ? PAC:19642573
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G26110 0.5kb upstream 0.5kb upstream 1691 true Chr2: 11120369-11122059 Arabidopsis thaliana
AT2G26110 0.5kb upstream 0.5kb upstream 500 false Chr2: 11120369-11120868 Arabidopsis thaliana
AT2G26110 0.5kb downstream 0.5kb downstream 1691 true Chr2: 11120869-11122559 Arabidopsis thaliana
AT2G26110 0.5kb downstream 0.5kb downstream 500 false Chr2: 11122060-11122559 Arabidopsis thaliana
AT2G26110 1.0kb upstream 1.0kb upstream 2191 true Chr2: 11119869-11122059 Arabidopsis thaliana
AT2G26110 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11119869-11120868 Arabidopsis thaliana
AT2G26110 1.0kb downstream 1.0kb downstream 2191 true Chr2: 11120869-11123059 Arabidopsis thaliana
AT2G26110 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11122060-11123059 Arabidopsis thaliana
AT2G26110 2.0kb upstream 2.0kb upstream 3191 true Chr2: 11118869-11122059 Arabidopsis thaliana
AT2G26110 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11118869-11120868 Arabidopsis thaliana
AT2G26110 2.0kb downstream 2.0kb downstream 3191 true Chr2: 11120869-11124059 Arabidopsis thaliana
AT2G26110 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11122060-11124059 Arabidopsis thaliana
AT2G26110 5.0kb upstream 5.0kb upstream 6191 true Chr2: 11115869-11122059 Arabidopsis thaliana
AT2G26110 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11115869-11120868 Arabidopsis thaliana
AT2G26110 5.0kb downstream 5.0kb downstream 6191 true Chr2: 11120869-11127059 Arabidopsis thaliana
AT2G26110 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11122060-11127059 Arabidopsis thaliana
AT2G26110 10.0kb upstream 10.0kb upstream 11191 true Chr2: 11110869-11122059 Arabidopsis thaliana
AT2G26110 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11110869-11120868 Arabidopsis thaliana
AT2G26110 10.0kb downstream 10.0kb downstream 11191 true Chr2: 11120869-11132059 Arabidopsis thaliana
AT2G26110 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11122060-11132059 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361974 5261 Brassicaceae View MSA
123832346 5264 Brassicales-Malvales View MSA
124343649 5266 SBM View MSA
124248292 5268 Malvidae View MSA
124071784 5270 Rosid View MSA
123749105 5271 Pentapetalae View MSA
122787298 5272 Eudicot View MSA
122041618 5273 Angiosperm View MSA
121309871 5274 Embryophyte View MSA
123347511 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.41        
cufflinks 33.9     High  
cufflinks 19.005        
cufflinks 29.422        
cufflinks 14.265       Low
cufflinks 35.389     High High

0 Strain