Gene : AT2G40010 A. thaliana TAIR10
Defline:  (1 of 3) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  3376
Name:  ? AT2G40010 Secondary Identifier:  ? PAC:19639717
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40010 0.5kb upstream 0.5kb upstream 2570 true Chr2: 16708379-16710948 Arabidopsis thaliana
AT2G40010 0.5kb upstream 0.5kb upstream 500 false Chr2: 16710449-16710948 Arabidopsis thaliana
AT2G40010 0.5kb downstream 0.5kb downstream 2570 true Chr2: 16707879-16710448 Arabidopsis thaliana
AT2G40010 0.5kb downstream 0.5kb downstream 500 false Chr2: 16707879-16708378 Arabidopsis thaliana
AT2G40010 1.0kb upstream 1.0kb upstream 3070 true Chr2: 16708379-16711448 Arabidopsis thaliana
AT2G40010 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16710449-16711448 Arabidopsis thaliana
AT2G40010 1.0kb downstream 1.0kb downstream 3070 true Chr2: 16707379-16710448 Arabidopsis thaliana
AT2G40010 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16707379-16708378 Arabidopsis thaliana
AT2G40010 2.0kb upstream 2.0kb upstream 4070 true Chr2: 16708379-16712448 Arabidopsis thaliana
AT2G40010 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16710449-16712448 Arabidopsis thaliana
AT2G40010 2.0kb downstream 2.0kb downstream 4070 true Chr2: 16706379-16710448 Arabidopsis thaliana
AT2G40010 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16706379-16708378 Arabidopsis thaliana
AT2G40010 5.0kb upstream 5.0kb upstream 7070 true Chr2: 16708379-16715448 Arabidopsis thaliana
AT2G40010 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16710449-16715448 Arabidopsis thaliana
AT2G40010 5.0kb downstream 5.0kb downstream 7070 true Chr2: 16703379-16710448 Arabidopsis thaliana
AT2G40010 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16703379-16708378 Arabidopsis thaliana
AT2G40010 10.0kb upstream 10.0kb upstream 12070 true Chr2: 16708379-16720448 Arabidopsis thaliana
AT2G40010 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16710449-16720448 Arabidopsis thaliana
AT2G40010 10.0kb downstream 10.0kb downstream 12070 true Chr2: 16698379-16710448 Arabidopsis thaliana
AT2G40010 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16698379-16708378 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378299 5261 Brassicaceae View MSA
123836746 5264 Brassicales-Malvales View MSA
124342925 5266 SBM View MSA
124243369 5268 Malvidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.575        
cufflinks 5.244        
cufflinks 5.184        
cufflinks 5.668        
cufflinks 3.061       Low
cufflinks 7.883       High

0 Strain