Gene : AT2G39445 A. thaliana TAIR10
Defline:  (1 of 2) K03861 - phosphatidylinositol glycan, class P (PIGP, GPI19, DSCR5) Genomic Order:  3312
Name:  ? AT2G39445 Secondary Identifier:  ? PAC:19638507
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G39445 0.5kb upstream 0.5kb upstream 1722 true Chr2: 16470025-16471746 Arabidopsis thaliana
AT2G39445 0.5kb upstream 0.5kb upstream 500 false Chr2: 16471247-16471746 Arabidopsis thaliana
AT2G39445 0.5kb downstream 0.5kb downstream 1722 true Chr2: 16469525-16471246 Arabidopsis thaliana
AT2G39445 0.5kb downstream 0.5kb downstream 500 false Chr2: 16469525-16470024 Arabidopsis thaliana
AT2G39445 1.0kb upstream 1.0kb upstream 2222 true Chr2: 16470025-16472246 Arabidopsis thaliana
AT2G39445 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16471247-16472246 Arabidopsis thaliana
AT2G39445 1.0kb downstream 1.0kb downstream 2222 true Chr2: 16469025-16471246 Arabidopsis thaliana
AT2G39445 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16469025-16470024 Arabidopsis thaliana
AT2G39445 2.0kb upstream 2.0kb upstream 3222 true Chr2: 16470025-16473246 Arabidopsis thaliana
AT2G39445 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16471247-16473246 Arabidopsis thaliana
AT2G39445 2.0kb downstream 2.0kb downstream 3222 true Chr2: 16468025-16471246 Arabidopsis thaliana
AT2G39445 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16468025-16470024 Arabidopsis thaliana
AT2G39445 5.0kb upstream 5.0kb upstream 6222 true Chr2: 16470025-16476246 Arabidopsis thaliana
AT2G39445 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16471247-16476246 Arabidopsis thaliana
AT2G39445 5.0kb downstream 5.0kb downstream 6222 true Chr2: 16465025-16471246 Arabidopsis thaliana
AT2G39445 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16465025-16470024 Arabidopsis thaliana
AT2G39445 10.0kb upstream 10.0kb upstream 11222 true Chr2: 16470025-16481246 Arabidopsis thaliana
AT2G39445 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16471247-16481246 Arabidopsis thaliana
AT2G39445 10.0kb downstream 10.0kb downstream 11222 true Chr2: 16460025-16471246 Arabidopsis thaliana
AT2G39445 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16460025-16470024 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366830 5261 Brassicaceae View MSA
123829647 5264 Brassicales-Malvales View MSA
124321615 5266 SBM View MSA
124246787 5268 Malvidae View MSA
124062880 5270 Rosid View MSA
123738210 5271 Pentapetalae View MSA
122793363 5272 Eudicot View MSA
122046949 5273 Angiosperm View MSA
121344458 5274 Embryophyte View MSA
123428026 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.666        
cufflinks 4.767        
cufflinks 2.916       Low
cufflinks 5.535       High
cufflinks 3.156        
cufflinks 4.818        

0 Strain