Gene : AT2G38680 A. thaliana TAIR10
Defline:  (1 of 1) 3.1.3.91 - 7-methylguanosine nucleotidase / N(7)-methylguanylate 5'-phosphatase Genomic Order:  3235
Name:  ? AT2G38680 Secondary Identifier:  ? PAC:19642184
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7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5381 Arabidopsis thaliana pathologic  
Athaliana PWY-5695 Arabidopsis thaliana pathologic  
Athaliana PWY-6596 Arabidopsis thaliana pathologic  
Athaliana PWY-6606 Arabidopsis thaliana pathologic  
Athaliana PWY-6608 Arabidopsis thaliana pathologic  
Athaliana PWY-7185 Arabidopsis thaliana pathologic  
Athaliana SALVADEHYPOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38680 0.5kb upstream 0.5kb upstream 2570 true Chr2: 16174011-16176580 Arabidopsis thaliana
AT2G38680 0.5kb upstream 0.5kb upstream 500 false Chr2: 16176081-16176580 Arabidopsis thaliana
AT2G38680 0.5kb downstream 0.5kb downstream 2570 true Chr2: 16173511-16176080 Arabidopsis thaliana
AT2G38680 0.5kb downstream 0.5kb downstream 500 false Chr2: 16173511-16174010 Arabidopsis thaliana
AT2G38680 1.0kb upstream 1.0kb upstream 3070 true Chr2: 16174011-16177080 Arabidopsis thaliana
AT2G38680 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16176081-16177080 Arabidopsis thaliana
AT2G38680 1.0kb downstream 1.0kb downstream 3070 true Chr2: 16173011-16176080 Arabidopsis thaliana
AT2G38680 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16173011-16174010 Arabidopsis thaliana
AT2G38680 2.0kb upstream 2.0kb upstream 4070 true Chr2: 16174011-16178080 Arabidopsis thaliana
AT2G38680 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16176081-16178080 Arabidopsis thaliana
AT2G38680 2.0kb downstream 2.0kb downstream 4070 true Chr2: 16172011-16176080 Arabidopsis thaliana
AT2G38680 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16172011-16174010 Arabidopsis thaliana
AT2G38680 5.0kb upstream 5.0kb upstream 7070 true Chr2: 16174011-16181080 Arabidopsis thaliana
AT2G38680 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16176081-16181080 Arabidopsis thaliana
AT2G38680 5.0kb downstream 5.0kb downstream 7070 true Chr2: 16169011-16176080 Arabidopsis thaliana
AT2G38680 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16169011-16174010 Arabidopsis thaliana
AT2G38680 10.0kb upstream 10.0kb upstream 12070 true Chr2: 16174011-16186080 Arabidopsis thaliana
AT2G38680 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16176081-16186080 Arabidopsis thaliana
AT2G38680 10.0kb downstream 10.0kb downstream 12070 true Chr2: 16164011-16176080 Arabidopsis thaliana
AT2G38680 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16164011-16174010 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370315 5261 Brassicaceae View MSA
123829373 5264 Brassicales-Malvales View MSA
124345573 5266 SBM View MSA
124243297 5268 Malvidae View MSA
124064443 5270 Rosid View MSA
123745668 5271 Pentapetalae View MSA
122789463 5272 Eudicot View MSA
122047014 5273 Angiosperm View MSA
121348169 5274 Embryophyte View MSA
123380756 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.2        
cufflinks 8.354       High
cufflinks 4.979        
cufflinks 7.117        
cufflinks 4.465       Low
cufflinks 7.202        

0 Strain