Gene : AT2G38300 A. thaliana TAIR10
Defline:  (1 of 240) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Genomic Order:  3193
Name:  ? AT2G38300 Secondary Identifier:  ? PAC:19643460
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G38300 0.5kb upstream 0.5kb upstream 2533 true Chr2: 16043960-16046492 Arabidopsis thaliana
AT2G38300 0.5kb upstream 0.5kb upstream 500 false Chr2: 16045993-16046492 Arabidopsis thaliana
AT2G38300 0.5kb downstream 0.5kb downstream 2533 true Chr2: 16043460-16045992 Arabidopsis thaliana
AT2G38300 0.5kb downstream 0.5kb downstream 500 false Chr2: 16043460-16043959 Arabidopsis thaliana
AT2G38300 1.0kb upstream 1.0kb upstream 3033 true Chr2: 16043960-16046992 Arabidopsis thaliana
AT2G38300 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16045993-16046992 Arabidopsis thaliana
AT2G38300 1.0kb downstream 1.0kb downstream 3033 true Chr2: 16042960-16045992 Arabidopsis thaliana
AT2G38300 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16042960-16043959 Arabidopsis thaliana
AT2G38300 2.0kb upstream 2.0kb upstream 4033 true Chr2: 16043960-16047992 Arabidopsis thaliana
AT2G38300 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16045993-16047992 Arabidopsis thaliana
AT2G38300 2.0kb downstream 2.0kb downstream 4033 true Chr2: 16041960-16045992 Arabidopsis thaliana
AT2G38300 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16041960-16043959 Arabidopsis thaliana
AT2G38300 5.0kb upstream 5.0kb upstream 7033 true Chr2: 16043960-16050992 Arabidopsis thaliana
AT2G38300 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16045993-16050992 Arabidopsis thaliana
AT2G38300 5.0kb downstream 5.0kb downstream 7033 true Chr2: 16038960-16045992 Arabidopsis thaliana
AT2G38300 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16038960-16043959 Arabidopsis thaliana
AT2G38300 10.0kb upstream 10.0kb upstream 12033 true Chr2: 16043960-16055992 Arabidopsis thaliana
AT2G38300 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16045993-16055992 Arabidopsis thaliana
AT2G38300 10.0kb downstream 10.0kb downstream 12033 true Chr2: 16033960-16045992 Arabidopsis thaliana
AT2G38300 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16033960-16043959 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365262 5261 Brassicaceae View MSA
123831934 5264 Brassicales-Malvales View MSA
124342909 5266 SBM View MSA
124253520 5268 Malvidae View MSA
124069267 5270 Rosid View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.333        
cufflinks 0.757       Low
cufflinks 1.14        
cufflinks 1.462       High
cufflinks 0.785       Low
cufflinks 1.017        

0 Strain