Gene : AT2G37400 A. thaliana TAIR10
Defline:  (1 of 4) PTHR26312//PTHR26312:SF76 - FAMILY NOT NAMED // TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN Genomic Order:  3099
Name:  ? AT2G37400 Secondary Identifier:  ? PAC:19642485
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G37400 0.5kb upstream 0.5kb upstream 1748 true Chr2: 15696155-15697902 Arabidopsis thaliana
AT2G37400 0.5kb upstream 0.5kb upstream 500 false Chr2: 15697403-15697902 Arabidopsis thaliana
AT2G37400 0.5kb downstream 0.5kb downstream 1748 true Chr2: 15695655-15697402 Arabidopsis thaliana
AT2G37400 0.5kb downstream 0.5kb downstream 500 false Chr2: 15695655-15696154 Arabidopsis thaliana
AT2G37400 1.0kb upstream 1.0kb upstream 2248 true Chr2: 15696155-15698402 Arabidopsis thaliana
AT2G37400 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15697403-15698402 Arabidopsis thaliana
AT2G37400 1.0kb downstream 1.0kb downstream 2248 true Chr2: 15695155-15697402 Arabidopsis thaliana
AT2G37400 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15695155-15696154 Arabidopsis thaliana
AT2G37400 2.0kb upstream 2.0kb upstream 3248 true Chr2: 15696155-15699402 Arabidopsis thaliana
AT2G37400 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15697403-15699402 Arabidopsis thaliana
AT2G37400 2.0kb downstream 2.0kb downstream 3248 true Chr2: 15694155-15697402 Arabidopsis thaliana
AT2G37400 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15694155-15696154 Arabidopsis thaliana
AT2G37400 5.0kb upstream 5.0kb upstream 6248 true Chr2: 15696155-15702402 Arabidopsis thaliana
AT2G37400 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15697403-15702402 Arabidopsis thaliana
AT2G37400 5.0kb downstream 5.0kb downstream 6248 true Chr2: 15691155-15697402 Arabidopsis thaliana
AT2G37400 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15691155-15696154 Arabidopsis thaliana
AT2G37400 10.0kb upstream 10.0kb upstream 11248 true Chr2: 15696155-15707402 Arabidopsis thaliana
AT2G37400 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15697403-15707402 Arabidopsis thaliana
AT2G37400 10.0kb downstream 10.0kb downstream 11248 true Chr2: 15686155-15697402 Arabidopsis thaliana
AT2G37400 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15686155-15696154 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379124 5261 Brassicaceae View MSA
123840752 5264 Brassicales-Malvales View MSA
124338803 5266 SBM View MSA
124237294 5268 Malvidae View MSA
124062008 5270 Rosid View MSA
123737830 5271 Pentapetalae View MSA
122791127 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.745        
cufflinks 25.662        
cufflinks 18.098        
cufflinks 23.123        
cufflinks 13.739       Low
cufflinks 28.953       High

0 Strain