Gene : SWC2 A. thaliana TAIR10
Primary Identifier:  ? AT2G36740 Defline:  (1 of 1) K11664 - vacuolar protein sorting-associated protein 72 (VPS72, TCFL1, YL1)
Genomic Order:  3025 Name:  ? AT2G36740
Secondary Identifier:  ? PAC:19639046
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G36740 0.5kb upstream 0.5kb upstream 3646 true Chr2: 15406690-15410335 Arabidopsis thaliana
AT2G36740 0.5kb upstream 0.5kb upstream 500 false Chr2: 15409836-15410335 Arabidopsis thaliana
AT2G36740 0.5kb downstream 0.5kb downstream 3646 true Chr2: 15406190-15409835 Arabidopsis thaliana
AT2G36740 0.5kb downstream 0.5kb downstream 500 false Chr2: 15406190-15406689 Arabidopsis thaliana
AT2G36740 1.0kb upstream 1.0kb upstream 4146 true Chr2: 15406690-15410835 Arabidopsis thaliana
AT2G36740 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15409836-15410835 Arabidopsis thaliana
AT2G36740 1.0kb downstream 1.0kb downstream 4146 true Chr2: 15405690-15409835 Arabidopsis thaliana
AT2G36740 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15405690-15406689 Arabidopsis thaliana
AT2G36740 2.0kb upstream 2.0kb upstream 5146 true Chr2: 15406690-15411835 Arabidopsis thaliana
AT2G36740 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15409836-15411835 Arabidopsis thaliana
AT2G36740 2.0kb downstream 2.0kb downstream 5146 true Chr2: 15404690-15409835 Arabidopsis thaliana
AT2G36740 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15404690-15406689 Arabidopsis thaliana
AT2G36740 5.0kb upstream 5.0kb upstream 8146 true Chr2: 15406690-15414835 Arabidopsis thaliana
AT2G36740 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15409836-15414835 Arabidopsis thaliana
AT2G36740 5.0kb downstream 5.0kb downstream 8146 true Chr2: 15401690-15409835 Arabidopsis thaliana
AT2G36740 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15401690-15406689 Arabidopsis thaliana
AT2G36740 10.0kb upstream 10.0kb upstream 13146 true Chr2: 15406690-15419835 Arabidopsis thaliana
AT2G36740 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15409836-15419835 Arabidopsis thaliana
AT2G36740 10.0kb downstream 10.0kb downstream 13146 true Chr2: 15396690-15409835 Arabidopsis thaliana
AT2G36740 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15396690-15406689 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360176 5261 Brassicaceae View MSA
123834241 5264 Brassicales-Malvales View MSA
124342342 5266 SBM View MSA
124240169 5268 Malvidae View MSA
124060580 5270 Rosid View MSA
123736798 5271 Pentapetalae View MSA
122788024 5272 Eudicot View MSA
122046393 5273 Angiosperm View MSA
121347831 5274 Embryophyte View MSA
123424205 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.386        
cufflinks 6.115        
cufflinks 4.356        
cufflinks 6.302       High
cufflinks 3.738       Low
cufflinks 5.819        

0 Strain