Gene : AT2G36080 A. thaliana TAIR10
Defline:  (1 of 92) PF02362 - B3 DNA binding domain (B3) Genomic Order:  2953
Name:  ? AT2G36080 Secondary Identifier:  ? PAC:19643462
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G36080 0.5kb upstream 0.5kb upstream 3817 true Chr2: 15148259-15152075 Arabidopsis thaliana
AT2G36080 0.5kb upstream 0.5kb upstream 500 false Chr2: 15151576-15152075 Arabidopsis thaliana
AT2G36080 0.5kb downstream 0.5kb downstream 3817 true Chr2: 15147759-15151575 Arabidopsis thaliana
AT2G36080 0.5kb downstream 0.5kb downstream 500 false Chr2: 15147759-15148258 Arabidopsis thaliana
AT2G36080 1.0kb upstream 1.0kb upstream 4317 true Chr2: 15148259-15152575 Arabidopsis thaliana
AT2G36080 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15151576-15152575 Arabidopsis thaliana
AT2G36080 1.0kb downstream 1.0kb downstream 4317 true Chr2: 15147259-15151575 Arabidopsis thaliana
AT2G36080 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15147259-15148258 Arabidopsis thaliana
AT2G36080 2.0kb upstream 2.0kb upstream 5317 true Chr2: 15148259-15153575 Arabidopsis thaliana
AT2G36080 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15151576-15153575 Arabidopsis thaliana
AT2G36080 2.0kb downstream 2.0kb downstream 5317 true Chr2: 15146259-15151575 Arabidopsis thaliana
AT2G36080 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15146259-15148258 Arabidopsis thaliana
AT2G36080 5.0kb upstream 5.0kb upstream 8317 true Chr2: 15148259-15156575 Arabidopsis thaliana
AT2G36080 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15151576-15156575 Arabidopsis thaliana
AT2G36080 5.0kb downstream 5.0kb downstream 8317 true Chr2: 15143259-15151575 Arabidopsis thaliana
AT2G36080 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15143259-15148258 Arabidopsis thaliana
AT2G36080 10.0kb upstream 10.0kb upstream 13317 true Chr2: 15148259-15161575 Arabidopsis thaliana
AT2G36080 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15151576-15161575 Arabidopsis thaliana
AT2G36080 10.0kb downstream 10.0kb downstream 13317 true Chr2: 15138259-15151575 Arabidopsis thaliana
AT2G36080 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15138259-15148258 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380057 5261 Brassicaceae View MSA
123841427 5264 Brassicales-Malvales View MSA
124349842 5266 SBM View MSA
124251468 5268 Malvidae View MSA
124063141 5270 Rosid View MSA
123743640 5271 Pentapetalae View MSA
122794380 5272 Eudicot View MSA
122049835 5273 Angiosperm View MSA
121349423 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.514        
cufflinks 0.5       Low
cufflinks 2.523        
cufflinks 0.833        
cufflinks 3.922       High
cufflinks 0.566        

0 Strain