Gene : AT2G36000 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13068//PTHR13068:SF22 - CGI-12 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2944
Name:  ? AT2G36000 Secondary Identifier:  ? PAC:19639642
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G36000 0.5kb upstream 0.5kb upstream 2123 true Chr2: 15116575-15118697 Arabidopsis thaliana
AT2G36000 0.5kb upstream 0.5kb upstream 500 false Chr2: 15116575-15117074 Arabidopsis thaliana
AT2G36000 0.5kb downstream 0.5kb downstream 2123 true Chr2: 15117075-15119197 Arabidopsis thaliana
AT2G36000 0.5kb downstream 0.5kb downstream 500 false Chr2: 15118698-15119197 Arabidopsis thaliana
AT2G36000 1.0kb upstream 1.0kb upstream 2623 true Chr2: 15116075-15118697 Arabidopsis thaliana
AT2G36000 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15116075-15117074 Arabidopsis thaliana
AT2G36000 1.0kb downstream 1.0kb downstream 2623 true Chr2: 15117075-15119697 Arabidopsis thaliana
AT2G36000 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15118698-15119697 Arabidopsis thaliana
AT2G36000 2.0kb upstream 2.0kb upstream 3623 true Chr2: 15115075-15118697 Arabidopsis thaliana
AT2G36000 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15115075-15117074 Arabidopsis thaliana
AT2G36000 2.0kb downstream 2.0kb downstream 3623 true Chr2: 15117075-15120697 Arabidopsis thaliana
AT2G36000 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15118698-15120697 Arabidopsis thaliana
AT2G36000 5.0kb upstream 5.0kb upstream 6623 true Chr2: 15112075-15118697 Arabidopsis thaliana
AT2G36000 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15112075-15117074 Arabidopsis thaliana
AT2G36000 5.0kb downstream 5.0kb downstream 6623 true Chr2: 15117075-15123697 Arabidopsis thaliana
AT2G36000 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15118698-15123697 Arabidopsis thaliana
AT2G36000 10.0kb upstream 10.0kb upstream 11623 true Chr2: 15107075-15118697 Arabidopsis thaliana
AT2G36000 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15107075-15117074 Arabidopsis thaliana
AT2G36000 10.0kb downstream 10.0kb downstream 11623 true Chr2: 15117075-15128697 Arabidopsis thaliana
AT2G36000 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15118698-15128697 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373529 5261 Brassicaceae View MSA
123830621 5264 Brassicales-Malvales View MSA
124342719 5266 SBM View MSA
124251019 5268 Malvidae View MSA
124067504 5270 Rosid View MSA
123741152 5271 Pentapetalae View MSA
122793489 5272 Eudicot View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.014        
cufflinks 3.241        
cufflinks 22.73       High
cufflinks 3.2        
cufflinks 18.63        
cufflinks 2.357       Low

0 Strain