Gene : BRXL1 A. thaliana TAIR10
Primary Identifier:  ? AT2G35600 Defline:  (1 of 5) PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N)
Genomic Order:  2896 Name:  ? AT2G35600
Secondary Identifier:  ? PAC:19641617
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G35600 0.5kb upstream 0.5kb upstream 5013 true Chr2: 14940845-14945857 Arabidopsis thaliana
AT2G35600 0.5kb upstream 0.5kb upstream 500 false Chr2: 14945358-14945857 Arabidopsis thaliana
AT2G35600 0.5kb downstream 0.5kb downstream 5013 true Chr2: 14940345-14945357 Arabidopsis thaliana
AT2G35600 0.5kb downstream 0.5kb downstream 500 false Chr2: 14940345-14940844 Arabidopsis thaliana
AT2G35600 1.0kb upstream 1.0kb upstream 5513 true Chr2: 14940845-14946357 Arabidopsis thaliana
AT2G35600 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14945358-14946357 Arabidopsis thaliana
AT2G35600 1.0kb downstream 1.0kb downstream 5513 true Chr2: 14939845-14945357 Arabidopsis thaliana
AT2G35600 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14939845-14940844 Arabidopsis thaliana
AT2G35600 2.0kb upstream 2.0kb upstream 6513 true Chr2: 14940845-14947357 Arabidopsis thaliana
AT2G35600 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14945358-14947357 Arabidopsis thaliana
AT2G35600 2.0kb downstream 2.0kb downstream 6513 true Chr2: 14938845-14945357 Arabidopsis thaliana
AT2G35600 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14938845-14940844 Arabidopsis thaliana
AT2G35600 5.0kb upstream 5.0kb upstream 9513 true Chr2: 14940845-14950357 Arabidopsis thaliana
AT2G35600 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14945358-14950357 Arabidopsis thaliana
AT2G35600 5.0kb downstream 5.0kb downstream 9513 true Chr2: 14935845-14945357 Arabidopsis thaliana
AT2G35600 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14935845-14940844 Arabidopsis thaliana
AT2G35600 10.0kb upstream 10.0kb upstream 14513 true Chr2: 14940845-14955357 Arabidopsis thaliana
AT2G35600 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14945358-14955357 Arabidopsis thaliana
AT2G35600 10.0kb downstream 10.0kb downstream 14513 true Chr2: 14930845-14945357 Arabidopsis thaliana
AT2G35600 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14930845-14940844 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360731 5261 Brassicaceae View MSA
123798018 5264 Brassicales-Malvales View MSA
124295706 5266 SBM View MSA
124249794 5268 Malvidae View MSA
124062514 5270 Rosid View MSA
123739591 5271 Pentapetalae View MSA
122790552 5272 Eudicot View MSA
122046038 5273 Angiosperm View MSA
121349129 5274 Embryophyte View MSA
123381183 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.266     Low  
cufflinks 1.896        
cufflinks 0.167     Low Low
cufflinks 1.917        
cufflinks 0.172     Low Low
cufflinks 1.442        

0 Strain