Gene : CAT5 A. thaliana TAIR10
Primary Identifier:  ? AT2G34960 Defline:  (1 of 1) PTHR11785:SF267 - CATIONIC AMINO ACID TRANSPORTER 5
Genomic Order:  2832 Name:  ? AT2G34960
Secondary Identifier:  ? PAC:19638633
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G34960 0.5kb upstream 0.5kb upstream 2425 true Chr2: 14744037-14746461 Arabidopsis thaliana
AT2G34960 0.5kb upstream 0.5kb upstream 500 false Chr2: 14745962-14746461 Arabidopsis thaliana
AT2G34960 0.5kb downstream 0.5kb downstream 2425 true Chr2: 14743537-14745961 Arabidopsis thaliana
AT2G34960 0.5kb downstream 0.5kb downstream 500 false Chr2: 14743537-14744036 Arabidopsis thaliana
AT2G34960 1.0kb upstream 1.0kb upstream 2925 true Chr2: 14744037-14746961 Arabidopsis thaliana
AT2G34960 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14745962-14746961 Arabidopsis thaliana
AT2G34960 1.0kb downstream 1.0kb downstream 2925 true Chr2: 14743037-14745961 Arabidopsis thaliana
AT2G34960 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14743037-14744036 Arabidopsis thaliana
AT2G34960 2.0kb upstream 2.0kb upstream 3925 true Chr2: 14744037-14747961 Arabidopsis thaliana
AT2G34960 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14745962-14747961 Arabidopsis thaliana
AT2G34960 2.0kb downstream 2.0kb downstream 3925 true Chr2: 14742037-14745961 Arabidopsis thaliana
AT2G34960 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14742037-14744036 Arabidopsis thaliana
AT2G34960 5.0kb upstream 5.0kb upstream 6925 true Chr2: 14744037-14750961 Arabidopsis thaliana
AT2G34960 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14745962-14750961 Arabidopsis thaliana
AT2G34960 5.0kb downstream 5.0kb downstream 6925 true Chr2: 14739037-14745961 Arabidopsis thaliana
AT2G34960 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14739037-14744036 Arabidopsis thaliana
AT2G34960 10.0kb upstream 10.0kb upstream 11925 true Chr2: 14744037-14755961 Arabidopsis thaliana
AT2G34960 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14745962-14755961 Arabidopsis thaliana
AT2G34960 10.0kb downstream 10.0kb downstream 11925 true Chr2: 14734037-14745961 Arabidopsis thaliana
AT2G34960 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14734037-14744036 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364052 5261 Brassicaceae View MSA
123833331 5264 Brassicales-Malvales View MSA
124344811 5266 SBM View MSA
124247365 5268 Malvidae View MSA
124065749 5270 Rosid View MSA
123753183 5271 Pentapetalae View MSA
122795315 5272 Eudicot View MSA
122045421 5273 Angiosperm View MSA
121350184 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.049        
cufflinks 0.008     Low Low
cufflinks 0.65        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.135        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain