Gene : AT2G34590 A. thaliana TAIR10
Defline:  (1 of 3) K00162 - pyruvate dehydrogenase E1 component beta subunit (PDHB, pdhB) Genomic Order:  2794
Name:  ? AT2G34590 Secondary Identifier:  ? PAC:19641954
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5173 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PYRUVDEHYD-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G34590 0.5kb upstream 0.5kb upstream 2659 true Chr2: 14568811-14571469 Arabidopsis thaliana
AT2G34590 0.5kb upstream 0.5kb upstream 500 false Chr2: 14570970-14571469 Arabidopsis thaliana
AT2G34590 0.5kb downstream 0.5kb downstream 2659 true Chr2: 14568311-14570969 Arabidopsis thaliana
AT2G34590 0.5kb downstream 0.5kb downstream 500 false Chr2: 14568311-14568810 Arabidopsis thaliana
AT2G34590 1.0kb upstream 1.0kb upstream 3159 true Chr2: 14568811-14571969 Arabidopsis thaliana
AT2G34590 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14570970-14571969 Arabidopsis thaliana
AT2G34590 1.0kb downstream 1.0kb downstream 3159 true Chr2: 14567811-14570969 Arabidopsis thaliana
AT2G34590 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14567811-14568810 Arabidopsis thaliana
AT2G34590 2.0kb upstream 2.0kb upstream 4159 true Chr2: 14568811-14572969 Arabidopsis thaliana
AT2G34590 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14570970-14572969 Arabidopsis thaliana
AT2G34590 2.0kb downstream 2.0kb downstream 4159 true Chr2: 14566811-14570969 Arabidopsis thaliana
AT2G34590 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14566811-14568810 Arabidopsis thaliana
AT2G34590 5.0kb upstream 5.0kb upstream 7159 true Chr2: 14568811-14575969 Arabidopsis thaliana
AT2G34590 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14570970-14575969 Arabidopsis thaliana
AT2G34590 5.0kb downstream 5.0kb downstream 7159 true Chr2: 14563811-14570969 Arabidopsis thaliana
AT2G34590 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14563811-14568810 Arabidopsis thaliana
AT2G34590 10.0kb upstream 10.0kb upstream 12159 true Chr2: 14568811-14580969 Arabidopsis thaliana
AT2G34590 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14570970-14580969 Arabidopsis thaliana
AT2G34590 10.0kb downstream 10.0kb downstream 12159 true Chr2: 14558811-14570969 Arabidopsis thaliana
AT2G34590 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14558811-14568810 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375501 5261 Brassicaceae View MSA
123840734 5264 Brassicales-Malvales View MSA
124338432 5266 SBM View MSA
124241225 5268 Malvidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.336     High  
cufflinks 26.435       Low
cufflinks 53.002     High High
cufflinks 35.131     High  
cufflinks 41.832     High  
cufflinks 32.452     High  

0 Strain