Gene : AT2G34840 A. thaliana TAIR10
Defline:  (1 of 2) K17268 - coatomer protein complex, subunit epsilon (COPE) Genomic Order:  2820
Name:  ? AT2G34840 Secondary Identifier:  ? PAC:19641728
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G34840 0.5kb upstream 0.5kb upstream 2366 true Chr2: 14701988-14704353 Arabidopsis thaliana
AT2G34840 0.5kb upstream 0.5kb upstream 500 false Chr2: 14701988-14702487 Arabidopsis thaliana
AT2G34840 0.5kb downstream 0.5kb downstream 2366 true Chr2: 14702488-14704853 Arabidopsis thaliana
AT2G34840 0.5kb downstream 0.5kb downstream 500 false Chr2: 14704354-14704853 Arabidopsis thaliana
AT2G34840 1.0kb upstream 1.0kb upstream 2866 true Chr2: 14701488-14704353 Arabidopsis thaliana
AT2G34840 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14701488-14702487 Arabidopsis thaliana
AT2G34840 1.0kb downstream 1.0kb downstream 2866 true Chr2: 14702488-14705353 Arabidopsis thaliana
AT2G34840 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14704354-14705353 Arabidopsis thaliana
AT2G34840 2.0kb upstream 2.0kb upstream 3866 true Chr2: 14700488-14704353 Arabidopsis thaliana
AT2G34840 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14700488-14702487 Arabidopsis thaliana
AT2G34840 2.0kb downstream 2.0kb downstream 3866 true Chr2: 14702488-14706353 Arabidopsis thaliana
AT2G34840 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14704354-14706353 Arabidopsis thaliana
AT2G34840 5.0kb upstream 5.0kb upstream 6866 true Chr2: 14697488-14704353 Arabidopsis thaliana
AT2G34840 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14697488-14702487 Arabidopsis thaliana
AT2G34840 5.0kb downstream 5.0kb downstream 6866 true Chr2: 14702488-14709353 Arabidopsis thaliana
AT2G34840 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14704354-14709353 Arabidopsis thaliana
AT2G34840 10.0kb upstream 10.0kb upstream 11866 true Chr2: 14692488-14704353 Arabidopsis thaliana
AT2G34840 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14692488-14702487 Arabidopsis thaliana
AT2G34840 10.0kb downstream 10.0kb downstream 11866 true Chr2: 14702488-14714353 Arabidopsis thaliana
AT2G34840 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14704354-14714353 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379329 5261 Brassicaceae View MSA
123839531 5264 Brassicales-Malvales View MSA
124351412 5266 SBM View MSA
124240512 5268 Malvidae View MSA
124061720 5270 Rosid View MSA
123739353 5271 Pentapetalae View MSA
122787483 5272 Eudicot View MSA
122042986 5273 Angiosperm View MSA
121344320 5274 Embryophyte View MSA
123426837 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.363        
cufflinks 2.126        
cufflinks 1.938       Low
cufflinks 2.592        
cufflinks 2.118        
cufflinks 3.068       High

0 Strain