Gene : AT2G33550 A. thaliana TAIR10
Defline:  (1 of 29) PF13837 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_4) Genomic Order:  2682
Name:  ? AT2G33550 Secondary Identifier:  ? PAC:19638593
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G33550 0.5kb upstream 0.5kb upstream 2057 true Chr2: 14210032-14212088 Arabidopsis thaliana
AT2G33550 0.5kb upstream 0.5kb upstream 500 false Chr2: 14211589-14212088 Arabidopsis thaliana
AT2G33550 0.5kb downstream 0.5kb downstream 2057 true Chr2: 14209532-14211588 Arabidopsis thaliana
AT2G33550 0.5kb downstream 0.5kb downstream 500 false Chr2: 14209532-14210031 Arabidopsis thaliana
AT2G33550 1.0kb upstream 1.0kb upstream 2557 true Chr2: 14210032-14212588 Arabidopsis thaliana
AT2G33550 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14211589-14212588 Arabidopsis thaliana
AT2G33550 1.0kb downstream 1.0kb downstream 2557 true Chr2: 14209032-14211588 Arabidopsis thaliana
AT2G33550 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14209032-14210031 Arabidopsis thaliana
AT2G33550 2.0kb upstream 2.0kb upstream 3557 true Chr2: 14210032-14213588 Arabidopsis thaliana
AT2G33550 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14211589-14213588 Arabidopsis thaliana
AT2G33550 2.0kb downstream 2.0kb downstream 3557 true Chr2: 14208032-14211588 Arabidopsis thaliana
AT2G33550 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14208032-14210031 Arabidopsis thaliana
AT2G33550 5.0kb upstream 5.0kb upstream 6557 true Chr2: 14210032-14216588 Arabidopsis thaliana
AT2G33550 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14211589-14216588 Arabidopsis thaliana
AT2G33550 5.0kb downstream 5.0kb downstream 6557 true Chr2: 14205032-14211588 Arabidopsis thaliana
AT2G33550 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14205032-14210031 Arabidopsis thaliana
AT2G33550 10.0kb upstream 10.0kb upstream 11557 true Chr2: 14210032-14221588 Arabidopsis thaliana
AT2G33550 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14211589-14221588 Arabidopsis thaliana
AT2G33550 10.0kb downstream 10.0kb downstream 11557 true Chr2: 14200032-14211588 Arabidopsis thaliana
AT2G33550 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14200032-14210031 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375403 5261 Brassicaceae View MSA
123837770 5264 Brassicales-Malvales View MSA
124347352 5266 SBM View MSA
124253271 5268 Malvidae View MSA
124072606 5270 Rosid View MSA
123744307 5271 Pentapetalae View MSA
122795013 5272 Eudicot View MSA
122048158 5273 Angiosperm View MSA
121351140 5274 Embryophyte View MSA
123382022 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.366        
cufflinks 17.143        
cufflinks 6.319        
cufflinks 20.187       High
cufflinks 6.347        
cufflinks 15.791        

0 Strain