Gene : NTRA A. thaliana TAIR10
Primary Identifier:  ? AT2G17420 Defline:  (1 of 3) K00384 - thioredoxin reductase (NADPH) (trxB)
Genomic Order:  970 Name:  ? AT2G17420
Secondary Identifier:  ? PAC:19639653
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana THIOREDOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17420 0.5kb upstream 0.5kb upstream 2695 true Chr2: 7563845-7566539 Arabidopsis thaliana
AT2G17420 0.5kb upstream 0.5kb upstream 500 false Chr2: 7563845-7564344 Arabidopsis thaliana
AT2G17420 0.5kb downstream 0.5kb downstream 2695 true Chr2: 7564345-7567039 Arabidopsis thaliana
AT2G17420 0.5kb downstream 0.5kb downstream 500 false Chr2: 7566540-7567039 Arabidopsis thaliana
AT2G17420 1.0kb upstream 1.0kb upstream 3195 true Chr2: 7563345-7566539 Arabidopsis thaliana
AT2G17420 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7563345-7564344 Arabidopsis thaliana
AT2G17420 1.0kb downstream 1.0kb downstream 3195 true Chr2: 7564345-7567539 Arabidopsis thaliana
AT2G17420 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7566540-7567539 Arabidopsis thaliana
AT2G17420 2.0kb upstream 2.0kb upstream 4195 true Chr2: 7562345-7566539 Arabidopsis thaliana
AT2G17420 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7562345-7564344 Arabidopsis thaliana
AT2G17420 2.0kb downstream 2.0kb downstream 4195 true Chr2: 7564345-7568539 Arabidopsis thaliana
AT2G17420 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7566540-7568539 Arabidopsis thaliana
AT2G17420 5.0kb upstream 5.0kb upstream 7195 true Chr2: 7559345-7566539 Arabidopsis thaliana
AT2G17420 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7559345-7564344 Arabidopsis thaliana
AT2G17420 5.0kb downstream 5.0kb downstream 7195 true Chr2: 7564345-7571539 Arabidopsis thaliana
AT2G17420 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7566540-7571539 Arabidopsis thaliana
AT2G17420 10.0kb upstream 10.0kb upstream 12195 true Chr2: 7554345-7566539 Arabidopsis thaliana
AT2G17420 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7554345-7564344 Arabidopsis thaliana
AT2G17420 10.0kb downstream 10.0kb downstream 12195 true Chr2: 7564345-7576539 Arabidopsis thaliana
AT2G17420 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7566540-7576539 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365446 5261 Brassicaceae View MSA
123840179 5264 Brassicales-Malvales View MSA
124343686 5266 SBM View MSA
124249529 5268 Malvidae View MSA
124061396 5270 Rosid View MSA
123746891 5271 Pentapetalae View MSA
122793572 5272 Eudicot View MSA
122044945 5273 Angiosperm View MSA
121345859 5274 Embryophyte View MSA
123424818 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.688     High  
cufflinks 89.067     High  
cufflinks 35.075     High Low
cufflinks 95.631     High  
cufflinks 42.368     High  
cufflinks 100.975     High High

0 Strain